Gene Slin_1198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1198 
Symbol 
ID8724931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1458621 
End bp1459457 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content51% 
IMG OID 
Productfumarylacetoacetate (FAA) hydrolase 
Protein accessionYP_003386048 
Protein GI284036118 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTCT ACAAAACCCG CTTCGGCACT GTCGTTGAAT TAGAAAATCA ATTTTACTCC 
GTCCCCGTCG ATAGTTGGGA TGAACTAATC AATCGGGATG ATCTGCACGA ATTTTTGACC
ACCCTCACTG CTGTAGCGCC ATCAACCGAC GAGTTTCAAA GCTGGACGAA GAATGGATTG
CTGGCACCGA TTGGCCGACA GGAAGTATGG GCTTCAGGCG TTACCTATTT ACGCAGCCGC
GATGCGCGAA TGGAAGAATC CAAAAAATCG GGGGGTGATA ATTTTTACGA CCGCGTGTAC
GCCGCCGAAA GGCCCGAACT GTTCTTTAAA TCAACTCCCG AACGCGTAAT GGGGCCGGGC
CAAAAGGTCC GCATCCGTGC CGATTCGACC TGGAATGTAC CCGAGCCGGA GCTGACACTT
TTTATAACCT CATCGGGTAA AATTGTGGGT TATACCTGCG GTAACGATAT GAGTTCTCGC
AGCATCGAAG GCGAGAATCC GTTATATCTG CCTCAGGCCA AAAGTTACGA TGGCAGCGCA
GCCCTGGGGC CGTGCCTGTA CGTACCCGAA ACGCCAATTT CGCCCGAGAC ACAGATACAA
CTGGAAATTC TTCGGGATGG GCAAACGGCT TTCGTCAACA ACATTGCCAT TAACCAGATG
AAGCGGCAGC ATACCGAACT TGTTTCCTAT CTCTACCGCG AGTGCTCTTT TTCCTTTGGG
TGCTTCCTGA TGACCGGCAC CGGCATCGTT CCGCCCGATA GCTTCACGCT TCAATCGGGC
GATGAAGTTA GAATTACCAT TGAGGGAATC GGTACGCTGG AGAATGTAGT GGCCTGA
 
Protein sequence
MKLYKTRFGT VVELENQFYS VPVDSWDELI NRDDLHEFLT TLTAVAPSTD EFQSWTKNGL 
LAPIGRQEVW ASGVTYLRSR DARMEESKKS GGDNFYDRVY AAERPELFFK STPERVMGPG
QKVRIRADST WNVPEPELTL FITSSGKIVG YTCGNDMSSR SIEGENPLYL PQAKSYDGSA
ALGPCLYVPE TPISPETQIQ LEILRDGQTA FVNNIAINQM KRQHTELVSY LYRECSFSFG
CFLMTGTGIV PPDSFTLQSG DEVRITIEGI GTLENVVA