Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_1107 |
Symbol | |
ID | 8724840 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 1356807 |
End bp | 1357889 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | oxidoreductase domain protein |
Protein accession | YP_003385957 |
Protein GI | 284036027 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.49503 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.561455 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAATAC CAAATAAGCC GCTACGTGTG TTGGTTGTCG GATGTGGTAA TATGGGTGCG TCGCATGCCA TTGCCTATAC AACAATCGGT GGTTTCGAAA TTTGCGGTAT CGTGTCAACC GGAAACAGCA AAGTTGTTCT GAACGAACGG CTGGGCGGTG GTTATTCATT ATATGATGAT TATGCGAAGG CGCTTGCCGA AACCCAACCG GATGCCGTTT GCATTTCTAC CTACCCGGAT ACACACGAAA AGTTTGCCAT AATGGCTTTT GAGCAAGGGT GTCATGTATT CATGGAAAAG CCTATTGCGG ATACGGTGGA AGGAGCCCGG AATGTGATGG CGGCTGCCCA GAAAGCCGAC AAAAAACTGG TTGTGGGCTA CATTTTACGG CATCATCCAT CCTGGGAAAA GTTTGTCGAG ATTGCCCAGG GATTAGGGAA ACCACTGGTG ATGCGCATGA ATCTCAATCA GCAAAGCCAC GGCACCATGT GGACCGTACA CCGGAACCTG ATGAAAAGCC TGAGCCCCAT CGTAGACTGC GGAGTGCATT ATATTGACGT GATGTGTCAG ATGACCCGTT CAAAGCCGCT ACAGGTAAAT GCAATTGGCG CCCGCTTAAC CAACGATATT CCGGCTGGTA ATTATAACTA CGGTCAGTTG CAGATTCGGT TTGAAGATGG CTCGGTGGGC TGGTACGAAG CTGGCTGGGG ACCTATGATG AGTGAGACCG CTTTCTTTGT GAAAGACGTA ATCGGACCCG ACGGCTGCGT GTCGATCGTA GCCAAAAATG CGGGCGCTGC CGGTAAATCA GACAATGTCG ATTCACATAC CAAAACGGAA TCGCTGCGTG TACACAAAGC CGCTCTGGAC GCCAATGATC AGTTTGTTGA AACGGATACC TGGATTGATA TGCAGGACGA ACCCGACCAT CAGGAACTTT GCAACCGCGA ACAGCGGTAT TTTCGGAAAG CTATTCTGGA GAATCTGGAC CTGACCGACC ACATGCAGGA TGCTGTCAGT AGTTTACAGA TTGCCTTCGC CTGCGACGAA TCTGTCCGCA CCGGACAACC GGTCATGTTA TAA
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Protein sequence | MSIPNKPLRV LVVGCGNMGA SHAIAYTTIG GFEICGIVST GNSKVVLNER LGGGYSLYDD YAKALAETQP DAVCISTYPD THEKFAIMAF EQGCHVFMEK PIADTVEGAR NVMAAAQKAD KKLVVGYILR HHPSWEKFVE IAQGLGKPLV MRMNLNQQSH GTMWTVHRNL MKSLSPIVDC GVHYIDVMCQ MTRSKPLQVN AIGARLTNDI PAGNYNYGQL QIRFEDGSVG WYEAGWGPMM SETAFFVKDV IGPDGCVSIV AKNAGAAGKS DNVDSHTKTE SLRVHKAALD ANDQFVETDT WIDMQDEPDH QELCNREQRY FRKAILENLD LTDHMQDAVS SLQIAFACDE SVRTGQPVML
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