Gene Slin_1107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1107 
Symbol 
ID8724840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1356807 
End bp1357889 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content50% 
IMG OID 
Productoxidoreductase domain protein 
Protein accessionYP_003385957 
Protein GI284036027 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.49503 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.561455 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAATAC CAAATAAGCC GCTACGTGTG TTGGTTGTCG GATGTGGTAA TATGGGTGCG 
TCGCATGCCA TTGCCTATAC AACAATCGGT GGTTTCGAAA TTTGCGGTAT CGTGTCAACC
GGAAACAGCA AAGTTGTTCT GAACGAACGG CTGGGCGGTG GTTATTCATT ATATGATGAT
TATGCGAAGG CGCTTGCCGA AACCCAACCG GATGCCGTTT GCATTTCTAC CTACCCGGAT
ACACACGAAA AGTTTGCCAT AATGGCTTTT GAGCAAGGGT GTCATGTATT CATGGAAAAG
CCTATTGCGG ATACGGTGGA AGGAGCCCGG AATGTGATGG CGGCTGCCCA GAAAGCCGAC
AAAAAACTGG TTGTGGGCTA CATTTTACGG CATCATCCAT CCTGGGAAAA GTTTGTCGAG
ATTGCCCAGG GATTAGGGAA ACCACTGGTG ATGCGCATGA ATCTCAATCA GCAAAGCCAC
GGCACCATGT GGACCGTACA CCGGAACCTG ATGAAAAGCC TGAGCCCCAT CGTAGACTGC
GGAGTGCATT ATATTGACGT GATGTGTCAG ATGACCCGTT CAAAGCCGCT ACAGGTAAAT
GCAATTGGCG CCCGCTTAAC CAACGATATT CCGGCTGGTA ATTATAACTA CGGTCAGTTG
CAGATTCGGT TTGAAGATGG CTCGGTGGGC TGGTACGAAG CTGGCTGGGG ACCTATGATG
AGTGAGACCG CTTTCTTTGT GAAAGACGTA ATCGGACCCG ACGGCTGCGT GTCGATCGTA
GCCAAAAATG CGGGCGCTGC CGGTAAATCA GACAATGTCG ATTCACATAC CAAAACGGAA
TCGCTGCGTG TACACAAAGC CGCTCTGGAC GCCAATGATC AGTTTGTTGA AACGGATACC
TGGATTGATA TGCAGGACGA ACCCGACCAT CAGGAACTTT GCAACCGCGA ACAGCGGTAT
TTTCGGAAAG CTATTCTGGA GAATCTGGAC CTGACCGACC ACATGCAGGA TGCTGTCAGT
AGTTTACAGA TTGCCTTCGC CTGCGACGAA TCTGTCCGCA CCGGACAACC GGTCATGTTA
TAA
 
Protein sequence
MSIPNKPLRV LVVGCGNMGA SHAIAYTTIG GFEICGIVST GNSKVVLNER LGGGYSLYDD 
YAKALAETQP DAVCISTYPD THEKFAIMAF EQGCHVFMEK PIADTVEGAR NVMAAAQKAD
KKLVVGYILR HHPSWEKFVE IAQGLGKPLV MRMNLNQQSH GTMWTVHRNL MKSLSPIVDC
GVHYIDVMCQ MTRSKPLQVN AIGARLTNDI PAGNYNYGQL QIRFEDGSVG WYEAGWGPMM
SETAFFVKDV IGPDGCVSIV AKNAGAAGKS DNVDSHTKTE SLRVHKAALD ANDQFVETDT
WIDMQDEPDH QELCNREQRY FRKAILENLD LTDHMQDAVS SLQIAFACDE SVRTGQPVML