| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_1090 |
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| Symbol | |
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| ID | 8724820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 1331654 |
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| End bp | 1333090 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | Outer membrane protein/protective antigen OMA87-like protein |
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| Protein accession | YP_003385940 |
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| Protein GI | 284036010 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.138177 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.283017 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCCGA AAAAGTGGCC GCTCCGTATT TTACTGCTTA CGGCTTTTCT GGTAACCTCT
TTTGCTGCTA TTGCCGACAC ACCAGTCGAC TCGACGCAGA AAGTTATTGT GCGGGCAGTT
TACCTGAAGG GTAACTTCCG TACCCGCGAC CGGATCATTC TTCGGGAAAT GACGCTCCAT
ATGGGCGACT CTGTCCGTCT CGCTGATCTG CCGGGACGTA TCGCCTGGGA TCAGCGGAAC
ATTAACAACA CCACCTTATT CGTAACGGTT GACGTAACCA GCGAATTTGC ACCGCCCGTC
GACTCTACGC AACTGGCTCA ACTGGACATA ACGGTGACCA TGAAAGAGCG GTGGTATTTC
ATTGCCTATC CCGTTTTCGA CCTGGCCGAT CGCAACTTCA ACGAATGGTG GTACGACCGG
GGGCACGACT TTCGGCGGGT TATTTACGGC GGGCACCTGA GTTACCGCAA CGTAACGGGT
AATAACGATA AGCTTCAGGT GGTTATTGAG CGGGGGTTTT TACAGCGAAC TATTCTGTCG
TACTCCAAAC CTTACATCGA CCGGGCACAG CGAATAGGTC TGCGAGCCGA CGTTGGGTAT
ATAACCAATA AGGAAATCCC GTACCGTACT CAGTTTGATA AATGGGTGTA CGTAAAGTCG
GAAGATGTTC TCCGCGAACG TGCTTACGCA GCTCTGGTCC TGACGCACCG GCGCGGCCTG
TATCACTACC ACACCCTCGA CACGCGGTAT GTTCGAAACA CCATCGCCGA TACCATTGCC
CGGCTAAACC CCGACTATTT TCTGGATGGG CAAAACCGGC TTCAGTTTCT GGCCATGAAT
TACATTTACC GCTACGACCG GCGCGATAAC GTCGTGTATC CGCTCCAGGG GACCTTGTTT
TCGGCGGGCA TTGGCGTATC GGGTATTTTG CCGAGCGACA ACTTTCACTT TCTCGATCTG
AATACATCGG CAACGCGGTA CTGGCCGCTG GGCAAACGAT TCTACCTGGC GGGCAGTGTA
CGGCTGCGAA GCACCTGGCC CGCCCGCCAA CCTTATTTTA CGCTGCGTGG TCTGGGTAGT
GGCAATGATA TGGTGCGAGG CTATGAACTT AACGTGATCG ATGGGCAGCG GACGTTCATC
TGGCGCAATA GTCTGCGGTA TCAGCTTTTC AATGTCCGCA AGCAACTCAA CTGGCTCCAT
GTGCGGCAGT TCAACACCGT ACCTGTAGCG GCTTACCTGA CCGCCTTCGG CGATGCGGGT
TATGTACATA GTACGGTGGC CGAACAATAC CAGAGCCGAC TGGCAAACAG ATTGCTCATG
GGCACGGGCA TGAGTCTGGA TATTGTCTCC TTCTATAACT TGGTCATGCG TTTCAGCGGC
ACGATCAACG CTCAGGGAAA AGCTGGTTTC TTCTTCAATC TGGCGCAGGA GTTATGA
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| Protein sequence | MIPKKWPLRI LLLTAFLVTS FAAIADTPVD STQKVIVRAV YLKGNFRTRD RIILREMTLH
MGDSVRLADL PGRIAWDQRN INNTTLFVTV DVTSEFAPPV DSTQLAQLDI TVTMKERWYF
IAYPVFDLAD RNFNEWWYDR GHDFRRVIYG GHLSYRNVTG NNDKLQVVIE RGFLQRTILS
YSKPYIDRAQ RIGLRADVGY ITNKEIPYRT QFDKWVYVKS EDVLRERAYA ALVLTHRRGL
YHYHTLDTRY VRNTIADTIA RLNPDYFLDG QNRLQFLAMN YIYRYDRRDN VVYPLQGTLF
SAGIGVSGIL PSDNFHFLDL NTSATRYWPL GKRFYLAGSV RLRSTWPARQ PYFTLRGLGS
GNDMVRGYEL NVIDGQRTFI WRNSLRYQLF NVRKQLNWLH VRQFNTVPVA AYLTAFGDAG
YVHSTVAEQY QSRLANRLLM GTGMSLDIVS FYNLVMRFSG TINAQGKAGF FFNLAQEL
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