Gene Slin_1081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1081 
Symbol 
ID8724811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1321058 
End bp1321495 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content46% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003385931 
Protein GI284036001 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.129849 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGGCT ATTGGTTGAT ATCGTTGACA ATCCTGCTAA TGGGATTAAC CTTTGTTATG 
GAAAGTGTAG CAAATCAGCA AAAGTCGCTC AAGGCGATAT TGACCGAAAA GAAAGACCAT
CGGCGTGTTT TATTAATTTA TAGCCGCGAC GATGCCCAGC ATTATAGCTT GCAGCAACAG
GAAGCACTGA ATGAAGAACG GGCTGGAGTT GATGAGCGTG ATTTGGATGT GATTGTCCTG
ATAGCCTCAT TAGTGATGGA GCCGGATCGC CAGTTTCTGA TGCACGATTA CAAGCTCAAC
CCCGCCGATA ATTTTGTTGC CTGGCTCATT GGAAAAGACG GCGGTATCAA GCAAACATAT
CATAAACCCG TTGACGTAAA GGAGCTGTTC AGAACCATCG ACAGCATGCC GATGCGCAAG
CAGGAAAGTA AACAGTGA
 
Protein sequence
MRGYWLISLT ILLMGLTFVM ESVANQQKSL KAILTEKKDH RRVLLIYSRD DAQHYSLQQQ 
EALNEERAGV DERDLDVIVL IASLVMEPDR QFLMHDYKLN PADNFVAWLI GKDGGIKQTY
HKPVDVKELF RTIDSMPMRK QESKQ