Gene Slin_1001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_1001 
Symbol 
ID8724731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1216877 
End bp1217080 
Gene Length204 bp 
Protein Length67 aa 
Translation table11 
GC content47% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003385851 
Protein GI284035921 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0058952 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.717116 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCGGAG GACATAAAGA ACCTGGGCAT ACAACCTTTA GCACCGACCT TGGCGATGGC 
TTAGTGGTTG TTCGCCATGT CCCGGCTTTG ATTTGTGACC AATGTGGGGA GGAATGGATT
GACAACAAAA CAGCCCAACA ACTGGAAGGC ATCGTATTAG AGGCACGTCA GAAAAAACAT
CAATTAGAAG TACTATCGCT TTGA
 
Protein sequence
MCGGHKEPGH TTFSTDLGDG LVVVRHVPAL ICDQCGEEWI DNKTAQQLEG IVLEARQKKH 
QLEVLSL