Gene Slin_0881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0881 
Symbol 
ID8724611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1056163 
End bp1056531 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content51% 
IMG OID 
Producttranscriptional regulator, HxlR family 
Protein accessionYP_003385734 
Protein GI284035804 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGAAC GAAAGACATT GCCCGAGTTG AACTGCGGGC TCGACCTAAT TGGCGAAGTA 
CTGTACGGAA AATGGAAGAT GCGGCTCTTG TGGTTTATCC ACGAAGGTTT TCAACGCCCC
AGCGAGCTCC AGCGAAAAAT TCCGGGCGCT TCCCGGCGTG TACTGAACGT ACAGTTAAAG
GAACTGGAAA GCCACGAATT GGTGGGGAAA GTAATTTATC CGGTTGTTCC TCCTAAAGTG
GAGTATTTTC TCACCGATTT GGGCCAATCG CTCATCCCTG TTATTGGTGC TATCGGGCAA
TGGGGCGATC AGCATGAGGA GCAGTTGCGG ACGCTCATTC GGAAGGGCAT CAACCCTCAG
GCCCAATGA
 
Protein sequence
MYERKTLPEL NCGLDLIGEV LYGKWKMRLL WFIHEGFQRP SELQRKIPGA SRRVLNVQLK 
ELESHELVGK VIYPVVPPKV EYFLTDLGQS LIPVIGAIGQ WGDQHEEQLR TLIRKGINPQ
AQ