Gene Slin_0880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0880 
Symbol 
ID8724610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1055773 
End bp1056129 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content50% 
IMG OID 
Producttranscriptional regulator, HxlR family 
Protein accessionYP_003385733 
Protein GI284035803 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACGA CCGAGCTTAG GCACGCCGAG TGTATCAGTA CATTGCGACC TATCCGGGAT 
GCGCTGGATG TGTTGAATGG CAAATGGAAG CTGCCCATTA TTGTGGCCCT CACCTTCGGG
GAAAAGCGGT TTGGCGAAAT TTCCAAAGAA GTCCACGGGA TTACGGACCG AATGCTCGCC
AAAGAGCTAC GGGATATGGA GGTAAACGGG TTAGTAAAAC GGAAGGTGTA CGATACCTAT
CCCGTCAAAG TCACGTACAT GTTGACCCCG CATAGTGAGA CCCTTAACGG GGTTATTGAA
TCACTACGTA GCTGGGGAGA GTTACACCGA AAAAAAATCC TCTCGGGTGA CGTGTGA
 
Protein sequence
METTELRHAE CISTLRPIRD ALDVLNGKWK LPIIVALTFG EKRFGEISKE VHGITDRMLA 
KELRDMEVNG LVKRKVYDTY PVKVTYMLTP HSETLNGVIE SLRSWGELHR KKILSGDV