Gene Slin_0853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0853 
Symbol 
ID8724583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1031607 
End bp1032203 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content61% 
IMG OID 
Producttranscriptional regulator, AraC family 
Protein accessionYP_003385709 
Protein GI284035779 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTACCG AGCTATCCAT TTATCTGCAT GTGCTGCGGC TGCTGAGTGG CCAGTCCCTC 
GCTCCCGAAG CACTACACCT GGCTTATCCT GCTCCGGCCG ATACCCGCGA GCACGTTCGT
GTTTTTGCGC CTGCCCTGGT GCAATTTGGT ACCTCCTATT CAGCACTGCG CCTGCCAACT
GCCGTGTTAG CGCTACTACC CATCCTTACC GCCGACCCTG GGCTACTGGC GCTACTTGAG
CCGCATGCCG CTGCCCTGCT GGCCCGACTA CACAAACTGC CCGCTCTTGC CGACCGCGTA
CGCCACAAAT TGTTGCACCT GTTGGTTCAA TCCGAACCCA CCCTGGAAGC CGTGGCCAAA
GCCCTGAGCC TTAGCCCCCG CATCCTCCAG CGGCAACTGC GTCAGGACGG CTACAGCTAC
CAGCAACTAC TGGATGAGGT ACGCCGTGAG CTGGCTGAAC GCCACCTGCG CGAGGGTATT
CTCAGCATCA AAGACATCGC GCTACTGCTG GGCTTCGCCG AACCGAGTGT GTTTATCCGG
GCGTTTCGAC GCTGGACCGG CCAAACGCCC GGAATGTTCC GCCGGGCGTC GTACTAG
 
Protein sequence
MPTELSIYLH VLRLLSGQSL APEALHLAYP APADTREHVR VFAPALVQFG TSYSALRLPT 
AVLALLPILT ADPGLLALLE PHAAALLARL HKLPALADRV RHKLLHLLVQ SEPTLEAVAK
ALSLSPRILQ RQLRQDGYSY QQLLDEVRRE LAERHLREGI LSIKDIALLL GFAEPSVFIR
AFRRWTGQTP GMFRRASY