Gene Slin_0841 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0841 
Symbol 
ID8724572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1017269 
End bp1018018 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content53% 
IMG OID 
Producttranscriptional regulator, DeoR family 
Protein accessionYP_003385699 
Protein GI284035769 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTAAAG AAGTGCGTTT TGGCTTCATA CTGGATAAAG TCAGTACCTT GAACCAGGTA 
GGCCTTCAGG AATTAGCCCT CGATTTAGGC GTTTCGGAAG ATACCGTCCG GCGTGATATC
GACGTATTGA GTCGGCGGGG GCTGCTGCAG AAAGTACGGG GAGGTGCCAT TAGCCCCGCT
GTTAACCCGC TCTCGTTTCA GGATCGCCAG GATTGCTTTA CCGATGGCAA GCGTCGAATC
GGCTTAAAGG TCCAGGAGTT GCTGTTGACT GCGCAGACCG TCTTTATGGA TGGGGGAACA
ACGATGGTCG CCGTTGCCTC TTGTATCCCG CTGACAGCTC CGCTGCGGAT CATCACCAAC
AATATGGCTT TACTACCCGT TTTGGGCCAT CACGAGTCGG TCGAACTGAT CGTGCTGGGT
GGCCAATACA ATCCCGTTAC TAAAACCAAC ATGGGCCACC AAACCTGTCA ACAGGCGCTG
AATTATCAGG CCGATTTGTT TCTAATGGGA GCCTGCTCCA TCGATAGCCA GATGGGGGTA
ACGGCATCCA TGGCAGCCGA AGGGGAAATT AAAAAGGTTA TGTTCGATGC CTCACGCCAG
GTGGCCGTGC TGAGTAACCA GGAAAAGCTG GGTACGGTTG ATTTTTTCAA CGTAACCCGG
CTGGCGGACA TTGATTGGTT GATTACGGAC TTGAACCGCG ACGACAACCG ACTGGATGCT
TACCGGCTTA CGGGGTTGAA CATCCTGTAA
 
Protein sequence
MLKEVRFGFI LDKVSTLNQV GLQELALDLG VSEDTVRRDI DVLSRRGLLQ KVRGGAISPA 
VNPLSFQDRQ DCFTDGKRRI GLKVQELLLT AQTVFMDGGT TMVAVASCIP LTAPLRIITN
NMALLPVLGH HESVELIVLG GQYNPVTKTN MGHQTCQQAL NYQADLFLMG ACSIDSQMGV
TASMAAEGEI KKVMFDASRQ VAVLSNQEKL GTVDFFNVTR LADIDWLITD LNRDDNRLDA
YRLTGLNIL