| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0799 |
|---|
| Symbol | |
|---|
| ID | 8724530 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 968263 |
|---|
| End bp | 969324 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003385661 |
|---|
| Protein GI | 284035731 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.46134 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGGCA GAATTCAACA GGCCAAGCGG GAGTTTGGCC CAGACTACAT GCTCACTGCT
ACAAAATTAT CTAAAGTATA CGCCGACGTT CCGGCGGTTC GTACTGTTTC GCTGACGCTG
GCACCCGGCC AGATTATGGC GCTTGTGGGG GCCAGCGGTT CCGGCAAAAG CACACTGCTG
AGTCTGCTGG CGGGGCTGAC CGATGCGGAC ACCGGAGCGG TCAGCCTCAA TGATGAACGG
GTAGCGGGTC CGTCGGAAGT ACTGGTGCCG GGTCATAAAG ACATCCGGCT CGTGCATCAG
GAGTATCAGC TGATGCCCAA TGTATCCGTA CGGGAGAATA TCCGGTATGC GCTTCGATTT
TTTGAGAAGA GCTATCGCGA CTTTAGGGTC GATGAATTAC TTCGGCTGTG TCGCCTGACG
GAGGTACAGG ACCGGGTGCC CCGCCAGATA TCGGGGGGCG AAAAGCAGCG CACCGCTATT
GCCCGTGCTA TTGCCGATAG ACCCGCTGTT CTGCTGTTGG ATGAACCCTT TAGCCATCTG
GACCTGCCCA ACCGGCTTAT CGTGCGTGAT TTGCTGTTCG ATATGGTTCG AGAAGAGGCT
AACGGGTTGA CGGGTTCACG TGCAACGTCC TGCTTGTTTG TCACCCACGA TGCCACCGAT
GCGCTTTCCA TTGCCGACTC ACTGGGCATT ATGCGCGATG GTAAACTGAT ACAGATTGGC
TCGCCGGTGG CCGTTTATCA ACGGCCCTTA ACGGCCTATG CCGCTCAAAT GACGGGTCCT
GTCAATATTC TGAAAGCCAG ACACCTGCCT TTGCTGGGCT TACCCAGTTC GGCCAGTCCC
AATGAGTTAA TTTGTTTGCG GCCCGAGCAG ATTGTACTAA CCGAGGGCGG AGCCGTTGGT
ACCATTCGGG CGTTGTTTTT CAAGGGCAGC CATTACGAAT TGGAAATTGC GCTGTCGCGC
TATGTATTGC TGCGTTTGTT AACTACCCGC ACCGATTTGC ACATTGGCCA GCAGGTGGGC
ATCGGTGTTG CCAATGAGTC CGTTTGGACA CTAAAGCCTT AG
|
|---|
| Protein sequence | MPGRIQQAKR EFGPDYMLTA TKLSKVYADV PAVRTVSLTL APGQIMALVG ASGSGKSTLL
SLLAGLTDAD TGAVSLNDER VAGPSEVLVP GHKDIRLVHQ EYQLMPNVSV RENIRYALRF
FEKSYRDFRV DELLRLCRLT EVQDRVPRQI SGGEKQRTAI ARAIADRPAV LLLDEPFSHL
DLPNRLIVRD LLFDMVREEA NGLTGSRATS CLFVTHDATD ALSIADSLGI MRDGKLIQIG
SPVAVYQRPL TAYAAQMTGP VNILKARHLP LLGLPSSASP NELICLRPEQ IVLTEGGAVG
TIRALFFKGS HYELEIALSR YVLLRLLTTR TDLHIGQQVG IGVANESVWT LKP
|
|---|
| |