| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0798 |
|---|
| Symbol | |
|---|
| ID | 8724529 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 966612 |
|---|
| End bp | 968234 |
|---|
| Gene Length | 1623 bp |
|---|
| Protein Length | 540 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | Aldehyde Dehydrogenase |
|---|
| Protein accession | YP_003385660 |
|---|
| Protein GI | 284035730 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.397538 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTAATT CAACGCTTTT TCAACTCTTC CCGTCGGAAG ATCAGATTCC TGCCGATTAT
CGTATCGAAC CCATTCACCA GCGTGAATAC CTGCTTAATG GCGAGATGCG CCAATGGGAT
GGCCCTGTGT CTGACGTTTA TTCGCCGGTC TGTATCCCCG ACCAAAATGG AGTATTGCAG
CGCCAATTGG TAGGCAGCTT TCCCGTTACG GGACCTAAAG AAGCCGTAGA AGCGCTGGAT
GCGGCTGTTG CTGCCTACGA CAACGGACGG GGCGAGTGGC CCCAAATGTC AGTAGCCGGT
CGCATTGCCT GCATGGAAAC CTTTGTCGGG AAGATGCTCG AACAGAAAAA ACTGGTTGTT
AATCTGATCA TGTGGGAAAT CGGCAAAAAC CTTGCTGATG CTACTAAGGA GTTTGACCGA
ACGGTAACCT ACATCTACGA TACCATCGAT ACCCTGAAAA CAATGGACCG GAATTCGTCG
CGGTTCCGGA TTGAAGAAGG TATTATTGGC CAGATTCGGC GGTCGCCGTT GGGCGTGGTG
CTGGCTATGG GCCCGTTTAA TTATCCGCTC AACGAGACCT ATACAACGCT CATTCCGGCT
ATTCTGATGG GCAATACGAT TCTGTTCAAA ACACCCAAGC ACGGCTCTCT GTTGCATTAT
CCCCTGCTGG AAGCATTCCG TACCAGTTTT CCCAAAGGCG TCGTCAATTC GCTGTATGGC
CGGGGAGCCA ACGTAATTCC GCCTGTCATG CAGTCGGGAA AGGTAAATGT ACTGACGCTT
ATTGGCTCCA GCCGCGTAGC CGATGAACTC CAGCGACAAC ACCCGAAACT CAATCGGCTG
CGGTCGATCA TGAGTCTGGA TGCCAAAAAT GCCGCCATTA TTTTACCCGA TGCCGACCTG
GATGTTGCCG TCAAAGAATG TCTTTTGGGG ACGCTTTCGT TCAATGGGCA GCGGTGTACC
GCCATCAAGA TTATCTGGGT ACACCGTTCG GTTGCCGATG CGTTTCTGAA GCGCTTCGCT
CCGGAAGTGA GCAAGCTGAA ACCCGGAATG CCCTGGGAAG CCGGTGTACA GATTACCCCG
CTTCCCGAAC CAAACAAGAC CCAGTACCTG ACGGATATTA TTACCGATGC CAAAGCGGGT
GGTGCGTCTA TTGTCAATGA AGGCGGGGGC GAAACCGTGG CATCGTTGTT TGTACCGGCA
GTTGTTGCAC CCGTTAAAGA AGGGATGCGG TTGTACCGTG AAGAACAGTT TGGCCCCGTT
ATTCCGGTGG TGGTCTTTGA TGATAATGAG GAGTTTATCG ACTACCTCAT TACGGACGAT
CATGGTATGC AGGCGAGTAT TTTCGGCACC GAAACGGAAG GAATTTCCCG ATTAATCGAC
CCACTGGTGA ATCTGGTGAG CCGGGTAAAC ATCAATGCTC AATGCCAGCG GGGGCCGGAC
ACGTTTCCGT TTACGGGCCG TAAGGATTCC GCTGAGGGAA CTCTGTCGGT TGAAGATGCC
CTGCGGTCAT TCTCCATCCG GTCGGCGGTG GCTACCAAAG ATACAGCTGC CAATAAAGCG
ATTTTGAATG ACATTGTGGA GCATCATAAA TCGACATTCT TAAGTACAAA TTTTATTTTT
TAA
|
|---|
| Protein sequence | MTNSTLFQLF PSEDQIPADY RIEPIHQREY LLNGEMRQWD GPVSDVYSPV CIPDQNGVLQ
RQLVGSFPVT GPKEAVEALD AAVAAYDNGR GEWPQMSVAG RIACMETFVG KMLEQKKLVV
NLIMWEIGKN LADATKEFDR TVTYIYDTID TLKTMDRNSS RFRIEEGIIG QIRRSPLGVV
LAMGPFNYPL NETYTTLIPA ILMGNTILFK TPKHGSLLHY PLLEAFRTSF PKGVVNSLYG
RGANVIPPVM QSGKVNVLTL IGSSRVADEL QRQHPKLNRL RSIMSLDAKN AAIILPDADL
DVAVKECLLG TLSFNGQRCT AIKIIWVHRS VADAFLKRFA PEVSKLKPGM PWEAGVQITP
LPEPNKTQYL TDIITDAKAG GASIVNEGGG ETVASLFVPA VVAPVKEGMR LYREEQFGPV
IPVVVFDDNE EFIDYLITDD HGMQASIFGT ETEGISRLID PLVNLVSRVN INAQCQRGPD
TFPFTGRKDS AEGTLSVEDA LRSFSIRSAV ATKDTAANKA ILNDIVEHHK STFLSTNFIF
|
|---|
| |