Gene Slin_0794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0794 
Symbol 
ID8724524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp960776 
End bp962014 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content51% 
IMG OID 
Productprotein of unknown function DUF214 
Protein accessionYP_003385656 
Protein GI284035726 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.157648 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTAC TTGAAAACAT ACGGGAAGGT TTACGTTCTA TTGCTGGCAA TCGCTTGCGG 
ACCATCCTGA CCTCCCTTAT TATCGCTATT GGTATTACGT CGCTGGTTGG CATTCTGACG
GCTATTGACG GTATTCAAAG CTCGGTCAAC AGTAGTTTTG CCGGTCTGGG GGCCAATACA
TTCAGCATTG TGGCCCGGCA GGATGCCTTT CGGCGGGGTG GGCGCATACA ACGGCAGGAT
GCCCCTATTG ACTATTTTGA CGCTATTAGC TTTAAACGGC GGTTTCCCTA CGGAGCTACA
ATTGCTGTTT CGAGTGTAGT AACGGGGGCT GCACAAGCCA AATTTGGCTC GAAGAAGACA
AACCCGAATG TGCAGCTAAT TGGCGTCGAT GATGTTTTCC TATCGGTAAA AGGATATACG
CTACAGAGTG GTCGTAATTT GACGCAAAAC GAGCTACAGT TCGCACGTAA CGTGGCTATA
ATCGGCAGCG AATTGGCCGG TACGTTATTT GAAAAAAAGG TCAATCCACT TAATCAACTG
ATCCGGGTAT CGGGTGCTCA ATATAAAATT GTAGGTGTAC TGGAAAAGAA AGGTGGGTTT
TCGGGAGGGG GCGACGACCG GCTGATTCTA ATACCACTCG ATAACGCCCG TGCTCTGGCA
GGAACCCGTA AACTGTCGTT TGATATTACG GCTTCGGTAC CTACCGTTGC AGACCAGGAC
GAAGCCGTTG GCGAAGCCCG TGGCACAATG CGGTTGGTAC GGCAGGACCC GCTGGGGCAA
CCTGATTCGT TCGATATTGA GCGGGCCGAC GAATTGGCCA AAGAAACGGC GAATATTACC
GGTTACCTGC GCATCGGTGG CTTTGGCATC GGGTTTATTA CCCTCCTGGG AGCTGCCATT
GCCCTGCTCA ACATCATGCT GGTGTCGGTT ACCGAACGAA CCCGCGAAAT CGGCATCAGA
AAATCGCTCG GAGCTACGCC CAAACGTATT CGGGAGCAGT TTCTGATCGA GGCTATTGTT
ATCTGTATTC TGGGCGGTCT GGGAGGAATT ATTCTTGGAC TGGGCATTGG CAACCTGATT
GCCACGCTTG TCAGCCAGGG CAAAGGTGGC TTTGTCGTGC CCTGGCTATG GATGGGATTG
GGAATCGTTG TTTGCGTTAC CGTTGGTCTT TTTGCTGGTA TTTATCCAGC CGTGCGGGCG
TCTAAACTTG ATCCCATCGA AGCATTACGA TACGAGTAG
 
Protein sequence
MNLLENIREG LRSIAGNRLR TILTSLIIAI GITSLVGILT AIDGIQSSVN SSFAGLGANT 
FSIVARQDAF RRGGRIQRQD APIDYFDAIS FKRRFPYGAT IAVSSVVTGA AQAKFGSKKT
NPNVQLIGVD DVFLSVKGYT LQSGRNLTQN ELQFARNVAI IGSELAGTLF EKKVNPLNQL
IRVSGAQYKI VGVLEKKGGF SGGGDDRLIL IPLDNARALA GTRKLSFDIT ASVPTVADQD
EAVGEARGTM RLVRQDPLGQ PDSFDIERAD ELAKETANIT GYLRIGGFGI GFITLLGAAI
ALLNIMLVSV TERTREIGIR KSLGATPKRI REQFLIEAIV ICILGGLGGI ILGLGIGNLI
ATLVSQGKGG FVVPWLWMGL GIVVCVTVGL FAGIYPAVRA SKLDPIEALR YE