Gene Slin_0793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0793 
Symbol 
ID8724523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp959351 
End bp960613 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content48% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003385655 
Protein GI284035725 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.101878 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGTC TGCTGTTACC GCTCATCCTT TTTCTCACGC TGACGGGGCA TGTATGGGCC 
TCTAAAATTC TGATTCCCAT GGATGATACC CAGAAGAATC ATTTGAAAGC CTATGGTATT
GCTTATTGGG TACTCAAAAC CCACGATACA GAAATAGACT GGCTGCTCAA TTACCGGGGC
GGTTCCTTCA TGATGCCGCA AAGCCAGTCA TTCATCAATG AAATGGTCAT ACGGGGGGTT
AGTTACGAAG TCATTTCCGA CGCTCAATCC GCTCAGATCC TATCGGAAGT TACAGCAGCC
GATGCCAATA TGGATGCGGT GAAACTCCAA AAACCTCCCA AAGTGGCGGT TTACTCCCCG
AAAACAAAAC AGCCCTGGGA TGATGCGGTA ACAATGGTCA TGACCTATGC CGAAATACCG
TACGATGTCG TTTTTGATGA GGAGGTCATG AACGGCAAAC TACCTGAATA CGACTGGCTT
CACTTACACC ACGAAGACTT TACGGGCCAG TATGGTAAGT TTTTCCATTT CAAAGACCAG
CCCTGGTACA TTGCCCAAAA GCAGGAAGCC GAAAACATTA CCCGCAAATT TGGCTTAACC
AAAGTGCCCC AGTTAAAGCT GGCTGTCAGC CAGAAAATCC GTGATTTCGT GCTGGGTGGC
GGTTATCTAT TTGCCATGTG CAATGCGACA GATACTTACG ACATTGCCCT CTCAGCGCAC
AACACCGACA TTGTCGACTC GTTCTACGAC GGTGACGGCG CAGATCCGAA CGCGAATAAT
AAGCTGGATT ATAGCCAGAC CATGGCGTTC CGAAACTTTC AGGTTTATAC AAACCCGTTC
CTGATCGAGT TCTCCAACAT CGACAATCAG CCCGAAGAGC GGGGCTTGAG TGAGCATAAC
GATTATTTCA CTCTGTTCCA GTTTTCGGCC AAGTACGACC CTATTCCAAC AATGCTGACG
CAGAACCATG CCAACGTCAT TAAAGGATTT ATGGGACAGA CAACGGCATT CAAGAAAAAT
TATATCAAAC CTGAGGTAGT GATCCTGGCC GAAAATCGGG CGGCTGGTGA AGCCCGTTAC
ATACACTCAC CCTATGGCCG GGGTTTCTTT ACGTTTTACG GCGGACACGA TCCAGAGGAC
TACCGACACG AAATAGGTGA AGAGCCCACA GACCTCAACC TTCACCCCAA CTCCGCCGGC
TATCGTCTTA TCCTCAATAA CATACTCTTC CCCGCAGCCA AGAAGAAGAA GCAGAAGACC
TAG
 
Protein sequence
MKRLLLPLIL FLTLTGHVWA SKILIPMDDT QKNHLKAYGI AYWVLKTHDT EIDWLLNYRG 
GSFMMPQSQS FINEMVIRGV SYEVISDAQS AQILSEVTAA DANMDAVKLQ KPPKVAVYSP
KTKQPWDDAV TMVMTYAEIP YDVVFDEEVM NGKLPEYDWL HLHHEDFTGQ YGKFFHFKDQ
PWYIAQKQEA ENITRKFGLT KVPQLKLAVS QKIRDFVLGG GYLFAMCNAT DTYDIALSAH
NTDIVDSFYD GDGADPNANN KLDYSQTMAF RNFQVYTNPF LIEFSNIDNQ PEERGLSEHN
DYFTLFQFSA KYDPIPTMLT QNHANVIKGF MGQTTAFKKN YIKPEVVILA ENRAAGEARY
IHSPYGRGFF TFYGGHDPED YRHEIGEEPT DLNLHPNSAG YRLILNNILF PAAKKKKQKT