Gene Slin_0642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0642 
Symbol 
ID8724371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp808608 
End bp809258 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content40% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003385504 
Protein GI284035574 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.254825 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0873851 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCAGCTA TTCAGCAAAC ATTGACGAAG CCTAAATGCC ACGAATCGTA CCGTAACGCC 
GATTTATTTG AAGCGTTTGA TGAGTGCTTC TTTAAAAAAT GCTACTTGAC CGAAGGGGCG
TTCTTTACCT CGTGGTCTAT GGACGTTGAG CATTTTGTTC CTCAAATTGA GCGTCCTGAT
TTAAAATACA ACTGGACTAA TTTATATCCA GCGTCGCATG ACGCAAATAT GATGAAGCCG
CGTAATACGC CAGCTGGAGG TTATCTTGAT TGTTGTGATC CAAATGATGA TGTCGAAAAC
GAAATCCTTT GCTTTATAGA TTATGAAAAC GATACTGTTC ATTTTGAAGC AAGGAACTCA
ACAAATATAA AGGCTGTCAA CACAGCTAAA CTTTTGCAAA AACTACACAA TGGAGATACA
ATCGAAACGA AGCGTAAAAC GGCTGAATTG AGAAATGCAA TTCATGGAAA ATACAAGAAA
ATACTGGAGT TGATCGATGA CTGGCGGGTG GCCCGCGAGA TTAGAGATGT TGAAGCTGAA
TTTAGAACTG AACGTATCCT AAAGGGTCTT CTTTCTCGAA AAACTTCCTT TACAATGCTA
ATGCGGTCGA CTAAAGCTGT TAAACGCTTA CCACCTTCTT TTTTCGATTA A
 
Protein sequence
MPAIQQTLTK PKCHESYRNA DLFEAFDECF FKKCYLTEGA FFTSWSMDVE HFVPQIERPD 
LKYNWTNLYP ASHDANMMKP RNTPAGGYLD CCDPNDDVEN EILCFIDYEN DTVHFEARNS
TNIKAVNTAK LLQKLHNGDT IETKRKTAEL RNAIHGKYKK ILELIDDWRV AREIRDVEAE
FRTERILKGL LSRKTSFTML MRSTKAVKRL PPSFFD