Gene Slin_0640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0640 
Symbol 
ID8724369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp805086 
End bp807188 
Gene Length2103 bp 
Protein Length700 aa 
Translation table11 
GC content55% 
IMG OID 
ProductNAD+ synthetase 
Protein accessionYP_003385502 
Protein GI284035572 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0635505 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTCGC CTTTATCTAT GAAACTCCTT AAAGTAGCCG CTGGTGTCCT GAATCAAATC 
CCGCTCGCCT GGGAACATAA CAAGCAAAAC ATCATCAACG CCATCGAAGA AGCCCAGCGG
CAGAACGTCA GTCTGCTGTG TCTGCCCGAA TTTTGTATTT CGGGATACGG CTGCGAAGAT
GCCTTTTTTG CCCAGAACAC CATCGACCAA TCCATTGCCT CATTACTGGA GATCGTTGAG
CATACGAACG ACATTGTCGT GGCCGTCGGC TTACCCCTGC GCCACAATAA CCGCACCTTC
GACACCGCCT GCCTGATTGC CAACAAACGG ATTTTAGGGT TCACGGCCAA GCAGTACATG
GCCAATAATG GTGTCCATTA CGAAACACGC TGGTTCCAAC CCTGGCCGCC CTACATTCGG
GACGAGATCA AAATCGGCGA CTTTACTTAT CCGTTTGGCG ATGTGGTTTA TGACCTGTCG
GGCATCAGGA TTGGGTTCGA GATTTGTGAA GATGCCTGGG TAGCCAGTCG GCCGGGACGT
CTTCTTTACG AGCGGGGGAT CGACATTATT CTGAACCCCA CGGCCAGCCA CTTTGCGTTC
CTGAAGTCGC AGGTGCGGGA GCGGTTCGTG GTCGATGCAT CGCGGTCGTT TGGAGTAAGC
TACGTGTACT CCAACATGCT GGGCAATGAA GCGGGCCGGA TTATCTACGA TGGTGACGCT
ATGGTAGCCT CCAACGGCGA ATTGCTGGTA TCGGGTCCAC GGTTGAGTTA CGAAGATTTT
GTCATCGTTC CGGCGGTCAT CGACGTAGAA GCTACCCGCC TGAACCAGAC GCAAAACCGG
GCCAATATCG CTTTGGCTTA CCCCAATCTA CGCGTTACAG ACCGGTTCGA CTGGCCCGAG
ATAGCACCCG TTATTCAAAA AGCACAGCTC GAAGGCTGGG AGCGGGGTGG TTATCTAAAA
GAAGAGGAGT TTGCGCGGGC GGTAGCACTC GGCCTGTTCG ATTACCTTCG GAAGAGCCGT
TCGCAGGGGT ATGTACTGTC GCTGAGTGGG GGTGCCGATT CGTCGGCCAT TGCGGCACTG
GTATTCCTGA TGATCCGGAT GGCGGTCGAG AATATCGGCA TGGATGGCGT CAAGAAAAAA
CTGGGCTACA TAAAAGCCAT TCAGGATTGC ACCACCGCCG AAGAGGTAGT CGGTAAACTC
CTCACCGTGA TGTATCAGGG TACCGAAAAC TCATCGGACG ATACGTTTAA CTCGGCGAAA
GAACTGGCGG ATGACATTGG TGCAAAATTC CTGAATATCA ATATCAATGG GCTGGTTGAA
ACGTATACCG GCCTGATTGA AGAGCAACTG GGCCGCAAAC TGTCGTGGGA TACAGACGAC
CTGGCGCTGC AGAACATTCA GGCGCGGGTG CGGGCTCCGA GTATCTGGAT GCTGGCCAAT
ATCAACAATG CCCTGCTGCT CACGACCTCC AACCGCTCCG AAGCCGCCGT TGGGTATGCC
ACCATGGACG GCGACACGGC GGGTAGCATT TCGCCCATAA CCGGTATCGA CAAGCATTTC
CTGCGGAGCT GGCTTCGCTG GCTCGAAACG GTTGGTCTGA ACGTTAAAAA CGCTCCCGAA
CCCACCGACC GGACCAGTCT GGCCACCAGC CCGGCATCGC CCGATGAGCT GATCAAAGTA
AAAGGGCTGA ACGCCGTAAA CAACCTGCAA CCCACCGCCG AACTCCGGCC GCAGGACAAA
AAGCAGACCG ACGAAGACGA CCTCATGCCG TACGATGTGC TGAACTCCAT CGAAGAGACG
GCCATCCGCG ACAAGCAGCC GCCAGTGGAG GTACTGAAAA TGATGGAAGT CCGGTATGCG
GGCGTACATG ATCGCGACAA GTTAGTGGTG TGGGTGGAGC GTTTCTTCAA ACTCTGGAGC
CGCAACCAAT GGAAGCGCGA ACGGTACGCC CCCTCGTTCC ATCTGGACGA CCACAACCTC
GATCCCCGTT CGTGGTGCCG CTTCCCGATC CTGTCGGGTG GTTTCGAGAA AGAGCTGGCC
GAGATGCGCG ACTGGGCCAA TGAACAGAAG CCTAATGGAC GAAAAGGGAA GATTGGGTTT
TAG
 
Protein sequence
MLSPLSMKLL KVAAGVLNQI PLAWEHNKQN IINAIEEAQR QNVSLLCLPE FCISGYGCED 
AFFAQNTIDQ SIASLLEIVE HTNDIVVAVG LPLRHNNRTF DTACLIANKR ILGFTAKQYM
ANNGVHYETR WFQPWPPYIR DEIKIGDFTY PFGDVVYDLS GIRIGFEICE DAWVASRPGR
LLYERGIDII LNPTASHFAF LKSQVRERFV VDASRSFGVS YVYSNMLGNE AGRIIYDGDA
MVASNGELLV SGPRLSYEDF VIVPAVIDVE ATRLNQTQNR ANIALAYPNL RVTDRFDWPE
IAPVIQKAQL EGWERGGYLK EEEFARAVAL GLFDYLRKSR SQGYVLSLSG GADSSAIAAL
VFLMIRMAVE NIGMDGVKKK LGYIKAIQDC TTAEEVVGKL LTVMYQGTEN SSDDTFNSAK
ELADDIGAKF LNININGLVE TYTGLIEEQL GRKLSWDTDD LALQNIQARV RAPSIWMLAN
INNALLLTTS NRSEAAVGYA TMDGDTAGSI SPITGIDKHF LRSWLRWLET VGLNVKNAPE
PTDRTSLATS PASPDELIKV KGLNAVNNLQ PTAELRPQDK KQTDEDDLMP YDVLNSIEET
AIRDKQPPVE VLKMMEVRYA GVHDRDKLVV WVERFFKLWS RNQWKRERYA PSFHLDDHNL
DPRSWCRFPI LSGGFEKELA EMRDWANEQK PNGRKGKIGF