| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0639 |
|---|
| Symbol | |
|---|
| ID | 8724368 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 804224 |
|---|
| End bp | 804919 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF1080 |
|---|
| Protein accession | YP_003385501 |
|---|
| Protein GI | 284035571 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.798724 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.087669 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACCAA CAATCGTTAA AAACGGGCTG ATTGCCTTTT GTTTTCTTCT GCTGATACTT
TGTTTCGGGG CGTCGGCCCA ATCAGCGCCG GGTAGCTCTG CGGGCTGGCG TCAACTCTTC
AACGGTAAAG ATCTTACGGG CTGGAAACAC GTAGGTAAGG GTCGGATGTC GGTCGAAAAC
GGGCTGATTC GCGGGCATGG CGGTATGGGG CTGTTGTACT GGACGAAAGA GAAATTTGGC
AACTGCACGA TTCGGCTAGT GTATAAAATG CAGAAGACGA ACAGCAATTC GGGGGTGTAT
ATCCGCATAC CGCTTGAGCC GCGCGAAGAG TGGATGCCGG TGCATTATGG CTACGAAGTG
CAGATCGACA ACCACCCCGA AACCTCCGAC GAGGACGAGT ACCACGTAAC GGGCACCCTG
TATTCCCTGA CCAAACCGCT TGCAAAACCC GGCAAGCCCG GCCCCCAGTG GAACACCATG
GAAATCACCC TCGACGGTCC CCGAACCCTC GTTTTAGTCA ATGGCGTGAA AGTGACCGAT
TACAAAGAAG GGGCACCGGT GCCACCGCGC AAGTTCGATT TTGAGCCGTT TCGCGGTTTG
CGCCCGAATA CCGGCTACAT CGGCCTGCAA AACCACGGCG AGCATGATGT AGTGTATTTC
AAAGAGGTTT CGGTGAAGCC GCTTTCGGTG AAATAG
|
|---|
| Protein sequence | MTPTIVKNGL IAFCFLLLIL CFGASAQSAP GSSAGWRQLF NGKDLTGWKH VGKGRMSVEN
GLIRGHGGMG LLYWTKEKFG NCTIRLVYKM QKTNSNSGVY IRIPLEPREE WMPVHYGYEV
QIDNHPETSD EDEYHVTGTL YSLTKPLAKP GKPGPQWNTM EITLDGPRTL VLVNGVKVTD
YKEGAPVPPR KFDFEPFRGL RPNTGYIGLQ NHGEHDVVYF KEVSVKPLSV K
|
|---|
| |