Gene Slin_0577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0577 
Symbol 
ID8724305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp707490 
End bp708758 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content53% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003385440 
Protein GI284035510 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGC GCCTATGTTT TCTGTTATTA CTGGCAATTA GTAGCTGGGC TGTACCGGGT 
CTGGCCAACT CGATTCTGAT TCCGATGGAT AATCAGCAGG CCAATCACCT CAAAGCGTAC
GGCATTGCCT ACAAAGCGCT GAAAGATGAT CTGGACGTAG ATTGGCTGCT GAACTACCGG
GGCGGAAGCT TTATGCTTAA GCAAGTGCCC GCCATTGAAG CGGAATGCCG CATTCGGGGT
GTTTCGGTGG AGGTTATCTC CGATGCCAGA GCCGCTTCCA TAAAGCAGCA ACTGTCCGAC
CCCGACGTAA ATATGAACGT GGTAACGCTC CAGAAAGCGG CCAAAATTAT CGTTTATTCG
CCCATCAAGG TAAGCCCCGC CGAGTTCGAA AATACCGATG CGGTACTGCT GGTACTTACC
TACGCCGAAA TTCCCTACGA AGTCGTTTAC GATGAAGAAG TGCTGAAAGG CGATCTGCCC
AAGTATGACT GGCTGCACCT GCACCACGAA GATTTTACGG GTCAATATGG CCGTAACATG
CACCGGCAAT CCATGACCGA TATTAAAGTG CAGGAAGACA TAGCGCGTAA ATACGGCTTC
TCGAAGGTGT CGCAGATGAA ACTCGCCGTT GCCAAAGGGA TCAAAGCGTT CTGCGCGGGT
GGCGGCTACC TGTTTGCAAT GTGCTCGGCC GCCGAAACGC TCGATATTGC GCTCGCTGCC
GACGGTGTCG ATATTGTAGG CAGCAGCTAC GACGGCGACG ACGTAGACCC CGATGCCCAG
TCGAAGCTGG ATTTCAGCAA GACATTCGCG TTCGGCAACT TTACCCTCGA AGGGGACAAT
GGCTACCGGG GGTTCTCGAC GTTTTCGGAT ATCAACTCAG CCGGGGGGCG TGGTTTCGAT
CAGGCGAGTG GCTTCTTTGA GCTGTTTAAC TTCTCGGCCA AGTGGGATGT GATTCCGGCC
ATGCTCACCC AAAACCACGA ATCGATCATT AAAGAATTTT TCGGACAAAC AACGGCTTTC
CGGAAAGGTG CCGTCAAACC CAGTTCGCTG GTGATGGGGG AGGGGAAAAC CTCCGACCGC
TATATTTATG GTGAGTCGGG AAAAGGGCAG TGGACATTCT ACGGGGGACA CGACCCCGAA
GGTCTGCGAG GTGGGGGTGG GTTCAGAAAC CCCACTGATC TGAATCTGCA CCCGCACTCG
CCAGGCTATC GGCTTATCCT GAACAATGTC CTGTTTCCGT CGGCCCGCAA AAAGAAGCGG
AAGACGTAG
 
Protein sequence
MKQRLCFLLL LAISSWAVPG LANSILIPMD NQQANHLKAY GIAYKALKDD LDVDWLLNYR 
GGSFMLKQVP AIEAECRIRG VSVEVISDAR AASIKQQLSD PDVNMNVVTL QKAAKIIVYS
PIKVSPAEFE NTDAVLLVLT YAEIPYEVVY DEEVLKGDLP KYDWLHLHHE DFTGQYGRNM
HRQSMTDIKV QEDIARKYGF SKVSQMKLAV AKGIKAFCAG GGYLFAMCSA AETLDIALAA
DGVDIVGSSY DGDDVDPDAQ SKLDFSKTFA FGNFTLEGDN GYRGFSTFSD INSAGGRGFD
QASGFFELFN FSAKWDVIPA MLTQNHESII KEFFGQTTAF RKGAVKPSSL VMGEGKTSDR
YIYGESGKGQ WTFYGGHDPE GLRGGGGFRN PTDLNLHPHS PGYRLILNNV LFPSARKKKR
KT