| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0568 |
|---|
| Symbol | |
|---|
| ID | 8724296 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 698296 |
|---|
| End bp | 700239 |
|---|
| Gene Length | 1944 bp |
|---|
| Protein Length | 647 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | Asparagine synthase (glutamine-hydrolyzing) |
|---|
| Protein accession | YP_003385431 |
|---|
| Protein GI | 284035501 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.591959 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGGGGA TTGCGGGCAT AATCCGATTT GATGGACAAA ACGTACTCGA TACGGACCGA
AGCCGGGTAA TTGAGTTGCT TAAACATCGG GGTAACCCGA CCAGCCGGGT AGTCAGTGGG
GGAGTACTGC TGGCATTCGG CGGCAGGCTG GAAAGAGCCG GTTTTGCCGA CGCCACCGTC
GATATGGACC AGTACGCCGG GAGAAAAAAC GGCTCTTTCT TGGATACGTA TAGCCGTAGC
GGTTGCCGGT CGCTGAACGA GCTAACGGCG GATTTCTCCC TGGCTCTCTG GGACCAGGCC
CGGCAAACGC TCGTCTGCGC CCGCGATTGC ATGGGCATAA AACCGTTGTA TTATGTGCAT
CAGCCCGGCC AATTTGTGGC TTTTGCGTCC GAAATAAAAG CACTACTGGC GCTACGGGAG
GTGATAGTTC GCCCCAACGA GCATAAATTT CGGGAGTATC TAACTTGGTC TACTGAATAT
ATCCCCTACA GCGCCGAAAC ATTTTATGAC GGTATTTTCA GCGTGCTGCC GGGTCATTAT
GCCGCGATGA ATGCCCAGGG CGTCGAGGTG CTTCCCTACT GGCAAATCGA CTGTAACCGG
TACGCCGATT TAACCAGCCC CGGCGATTAC CCGGCCTTCT TCAAGACCTG CTTTACGGAG
TCCGTCGACC GCCGGATGTC CGGTAAAAAA CTCGTTGGGG CGCATTTGAG CGGAGGACTC
GATTCGTCTT CGGTGAGTTG TGTGGCGCAG GCCTTGTTAC AGCAGCAGCA ACGCCCGGCC
CTGCATACGT TCAACATCGA CACCGAACAA CCCTCGGCCG ATGAGCAGGC ATTTGTGCAG
GCCGTTGTCG ATCAATGGCA CCCCAGCCAC CATACCGTTC ACCCGATCAG CAATGTGCTC
GACTCGGTGC TGAAAATTAA CCGCCTGTTC GACCGGCCGG AGCATTTTAT TATCCCGTCC
AGCTTTCACC TGAGCGTGTC GCAGGCTACG CAGCAGATCG GTTGCGATAG CCTGCTGACC
GGTCATGACG GCGATAGCGT CGCAACCACG GGTTTCGACT TTCTGGAGCA GCTTGTTGAT
GCCGCCGATT GGGCGAATCT AAAAACGGCC TGTCAGCAGA TTACGGGCTT GCCGGGCCGC
AATCTGGTTC ATATTCATGC AAACTGGACG AGCTTATCCG ACCAGTCGAA GTTTGACCAA
TACGCGCTGA GCGTTATTGG GAGCAACCTG AAAAAACGAT TTCGGGAGCA GCCGATTGCC
GACTTTCTGA CCATGTTTCG GGCGCAGAAG GCCACGCTTG GGCTGTCGTC ATCGGCTTTT
ATACGCTACC TGTCGAAGCG GCTGTTAAAC CGGTTGACCG CAACGGTTCC CCTCGCTACC
CCGCTGAGCG ATGCCTTCAG CCAGCGGGTG CCGGTACGGG CGCAGCAGAC AACGGCGGGG
TTGACGGCCG GTTGGACAGC GGGCCAGCAG ATGCCGCTCA ATCAGGTTCT CAACACAACC
AACGTCATTT GTAATGAGCA AATGAATCAC ATCGGCGAAT ACTACGGGCA TAGTTATTCG
TTTCCTTTCT TCGACAAACA CGTTATTGAG CTATGCCTGG CGACCCCGCT CGCGGTTCAT
TTCGACCGGG GCCGGGGGAG GGGGCTCATT CGGAATGGGT TAGGGTCTGT GTTGCCACCG
GCCGTTACCA GCCGACTCAC CAAAGCCAAT TTTGTGGAGT ATGGTACGCT CTCCGCCCAG
CAGCTCTATC AGGCCACCCG TGAGCTGTTT TCTTCGGCTA ACCATGCCAT CTGGACGGTA
GTTGATCGGC ATAAATTCGA TCAGCTTGTC AAAACGGTGT TCGACCTGCA GTTGCCTGTA
AGCCGAAAAA CCCGCTTCAA CTGGATGCTT TGCCGGGTTA TTTACCTGGC CCTCTGGCTC
GATACCCTGC CCAAAACATC CTGA
|
|---|
| Protein sequence | MGGIAGIIRF DGQNVLDTDR SRVIELLKHR GNPTSRVVSG GVLLAFGGRL ERAGFADATV
DMDQYAGRKN GSFLDTYSRS GCRSLNELTA DFSLALWDQA RQTLVCARDC MGIKPLYYVH
QPGQFVAFAS EIKALLALRE VIVRPNEHKF REYLTWSTEY IPYSAETFYD GIFSVLPGHY
AAMNAQGVEV LPYWQIDCNR YADLTSPGDY PAFFKTCFTE SVDRRMSGKK LVGAHLSGGL
DSSSVSCVAQ ALLQQQQRPA LHTFNIDTEQ PSADEQAFVQ AVVDQWHPSH HTVHPISNVL
DSVLKINRLF DRPEHFIIPS SFHLSVSQAT QQIGCDSLLT GHDGDSVATT GFDFLEQLVD
AADWANLKTA CQQITGLPGR NLVHIHANWT SLSDQSKFDQ YALSVIGSNL KKRFREQPIA
DFLTMFRAQK ATLGLSSSAF IRYLSKRLLN RLTATVPLAT PLSDAFSQRV PVRAQQTTAG
LTAGWTAGQQ MPLNQVLNTT NVICNEQMNH IGEYYGHSYS FPFFDKHVIE LCLATPLAVH
FDRGRGRGLI RNGLGSVLPP AVTSRLTKAN FVEYGTLSAQ QLYQATRELF SSANHAIWTV
VDRHKFDQLV KTVFDLQLPV SRKTRFNWML CRVIYLALWL DTLPKTS
|
|---|
| |