Gene Slin_0502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0502 
Symbol 
ID8724230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp618555 
End bp619595 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content49% 
IMG OID 
Productphenylalanyl-tRNA synthetase, alpha subunit 
Protein accessionYP_003385365 
Protein GI284035435 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGATA AAGTAAGGGA CATCCACCAG GAGATTGAAC AGTTTGATAT CAAATCGCCG 
GAACAGCTGG AGCAGTTTCG TATGCGATTT ATTAGCCGTA AAGGCGTTAT AACCGAATTA
TTTGAGGGGT TAAAGAGTGT TCCTCAAGCT GACCGGCGTA CGGTTGGACA GGAATTGAAC
GGGTTGAAAA ACTTTGCTCA GGAACGCTTC GACATGTTCA ACCAACTGGT TGAAGAGCAA
CGAACAGCCG CCAGCAGTGC CCCTCCTGTT GATCTTACTC TGCCAACCAT ACCCAACTTA
ACCGGCACTC AACACCCGCT GAGTCTGGTT CGGCAACGTA TTATCCAGAT TTTCGAGCGC
ATTGGCTTTA ACGTTGCCGA CGGCCCTGAG ATCGAATCGG ACTGGTATAA CTTTGGTGCC
CTGAACTTCC CGGACAACCA CCCGGCCCGC GATATGCAGG ACACGTTTTT TGTGGAGAAA
ATGACTGAAG GAGCTCCGTC AGACATGTTG CTCCGTACCC ACACATCGAA CGTACAAATT
CGGTTGATGG AACGGCAGAA GCCTCCAATT CGGTCGATCA TGCCGGGCCG CGTTTACCGA
AACGAAACAA TTTCGGCGCG GGCACACTGT ATGTTCCATC AGGTTGAAGG CATTTACATT
GACCGGAACG TGGGTTTTAA AGACCTGAAA GACACTCTGT ATCACTTTGT AAAGGAAATG
TTTGAGCCCG GTACACAGAT CCGTTTCCGG CCCTCTTACT TCCCATTCAC CGAGCCAAGC
GCCGAAATCG ACATTTCGTG TCAGATTTGT GGCGGCAAAG GCTGCAACAT CTGCAAACAC
TCGGGCTGGG TCGAAATCGC CGGTTCGGGT ATGGTTGACC CACAGGTTAT TGCCAATTGC
GGTATTGACC CCGAAGAATA CACAGGTTTT GCCTTTGGTA TGGGGATCGA ACGAATTACG
CAATTAAAAT ATGTAGTAAA CGACCTGCGC CTGTATACGG AAAACGACGT GCGTTTCCTG
CGCCAATTTG AAGGACTTTA A
 
Protein sequence
MLDKVRDIHQ EIEQFDIKSP EQLEQFRMRF ISRKGVITEL FEGLKSVPQA DRRTVGQELN 
GLKNFAQERF DMFNQLVEEQ RTAASSAPPV DLTLPTIPNL TGTQHPLSLV RQRIIQIFER
IGFNVADGPE IESDWYNFGA LNFPDNHPAR DMQDTFFVEK MTEGAPSDML LRTHTSNVQI
RLMERQKPPI RSIMPGRVYR NETISARAHC MFHQVEGIYI DRNVGFKDLK DTLYHFVKEM
FEPGTQIRFR PSYFPFTEPS AEIDISCQIC GGKGCNICKH SGWVEIAGSG MVDPQVIANC
GIDPEEYTGF AFGMGIERIT QLKYVVNDLR LYTENDVRFL RQFEGL