Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0442 |
Symbol | |
ID | 8724170 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 551127 |
End bp | 551915 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | anti-FecI sigma factor, FecR |
Protein accession | YP_003385305 |
Protein GI | 284035375 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0522826 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCACAAA AGTCATATTC TGCTTATAGC GCTGAGGAAT TCGTCCTTGA TGACTTATTC GTACGATGGG TTAAACACCC GAACGACGAA GAGGTCGCGT CCTATTGGCA GATATGGTTG TCGAACCATC CTCACCAGGA AGAAACAGTA GAGACAGCAC GGTACCTCAT TCAAACGGCC CGGCATTCTG ATTTACCAGC TCTGTCGTCT GACGAGATTT CAACAGTATG GGGACGCATA CGCGAGTCGC TTCAGACTAT GGAAGACGTC AGGCCACTTC AGCCCGATGT TCGGGCAATG GTTGGGTGGT GGTACTTTAT GCGAACTGTT CTGGCTGTAT TTGGTGTGAT AGCTCTTATT GGCTGGGCGC TCTGGATGCA GTACGGACCC GAGCAATCGG TATGGAGCGT CAGTACTCAC GCCTACCAAA CCCGTCAGAT TCGCTTACCG GACAATTCAA CCATGACGTT GTATCCGAAC AGCACCGCCC GCTACGCACG GCGTTGGTCT GACGAGACAC CAAGAGCGGT ATGGTTAAAG GGAGAAGCTG ATTTCTCGAT CATCCACCGA AACGACACCT CGTCGGCACG TTTGTTCAGA GTCCATACTG CTGGCCTGAC CATCGAAGCT GTAGGAACTA TCTTTCGGGT GAGACAACGA CCAACAGGAA CATCGGTAGC GCTTACTTCG GGGCAGGTAA GTTTACTCGT AAAATCGAAA GACCCAATAC GGCTTAAACC GGGCGAATCC ATTGAGATTG CCGCAGGTAC AACCAAGACA TTACCCTAG
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Protein sequence | MSQKSYSAYS AEEFVLDDLF VRWVKHPNDE EVASYWQIWL SNHPHQEETV ETARYLIQTA RHSDLPALSS DEISTVWGRI RESLQTMEDV RPLQPDVRAM VGWWYFMRTV LAVFGVIALI GWALWMQYGP EQSVWSVSTH AYQTRQIRLP DNSTMTLYPN STARYARRWS DETPRAVWLK GEADFSIIHR NDTSSARLFR VHTAGLTIEA VGTIFRVRQR PTGTSVALTS GQVSLLVKSK DPIRLKPGES IEIAAGTTKT LP
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