| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0428 |
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| Symbol | |
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| ID | 8724156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 532661 |
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| End bp | 534697 |
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| Gene Length | 2037 bp |
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| Protein Length | 678 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | |
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| Product | transglutaminase domain protein |
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| Protein accession | YP_003385291 |
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| Protein GI | 284035361 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTCTT TCCTAGCTTA CCGGCACTTT CCGTTGCCGA TGATTCTTTG CCTCTGCTTT
GGCCTGTCAG TAGGTCTGGC CCAATCCGCT AAAGAGCCCG ATCCAGCTCC CGTCGTTAAA
TTCGGCAAGA TTTCTCCCGA CCAGTTTTTA ACATCTTCGG CCGATTCTAC CGCCGAAGCC
ATTGTTCTTT ACGATTATGG CGAAGTAACC TTCGAGAACG GTAGCAGCGA ATTATGGATG
GTGAGTAAAT TCCATGTGCG GGTTCAAATC CGTAAGAAAT CGGCCTACGA TCGGGCCACG
ATCGAATTAC TCACCCGGCG TGGTAAGTCG GGGCAGCACG AGTTAGTGTC TGATTTTGAT
GGCTATACGT ACAACCTCAC AAAAGGGGAT GTTTCCATTG ATCGGTTGAC CAAAGCGGGC
CATTTTACGG AAAAAGCAAC GGATCAATTC TGGATAGAGA AATACACGCT CCCGAATGTT
CGGGAAGGGT CAATTGTTGA TTACCAATAC ACGATTCGTA CACCGTTTGG TGTGAGTTAC
AACCCCAAAA CATGGCGATT CCAGCAGGAT GTACCCGTTA AATGGAGTGA ATACCGGATT
ACAATTCCTG ATTATTTCTT TTACAAGGTA TTACAGAGTG GGTATATAGA GATGACCGTC
AACAAGCGGG AGTCGAAAAC GACCGATTTA TTTCCGGGCC AACCAACTGC GTCCGCATCG
GCTTATCGCT TTGCCATGAA AGATGTACCG GCGTTTCGGA ATGAAGCGTA TATCACAACC
GCCAACGATT ATATGGCGAA AATCGAGTTC GAGCTGGCCA GCTATCAAGT ACCCAGCGCG
ACGGGTTTTA TTAGTAAAAA TATTGCTGTT GGCTGGGACG CTATGGACAA AACACTGCTC
GATGATCCTG ACTTTGGCGG GCAGATAAAC CGAACCGGTT TTCTGCGGGA AACAGCCAAA
GCACTGACCG GGCAGGGGAC TGATACCCTG AGCCGGATTA AGGCTGCGTA TAACTTTATC
CGTCAGTCGA TCAAATGGAA TGACGAAGCG TCATACTGGT CGAAAAGTAT CAAAAAGGTT
TTTGACGCTA AAAAAGGGGA TGCCGGTGAT ATCAACTTAA TGTTGATCGC TCTGCTGCGG
GAGATGGACA TTGATGCAAA CCCGGTCATC CTCAGCACTC GCTCGCATGG TCGTATCAAT
GAGTCGTATG CCTTGCTTAA AAAATTCAAT TATGTAGTTG CGCATGTTTC GGTTGGCGGG
AAAGATGTTT TGCTGGATGC TACTGATCCT TATCTGCTAC CCGGCATGTT GCCGTCCCAT
TGCCTGAATG GCACAGGACG GCTTGTTCAT CCCACAAAGG CGCGGTTCCT GTCATTACTT
CCGACTGAAC GTGATGTTGA GGTGTATAAC ACCAGGCTGG TGATCGATAG TAATGGTGAC
CTCTCGGGCT CACTGTCGCA CTCACATGGC GGCTATAGTG CATGGAGCAG CCGGAAGCTG
TTTGCCGCTG TAGGGAAAGC AAAGTACTTG GAGGGTATTC AGAAAGAACA TGCCTCCTGG
CAGATCGAGA AGGCCGAGTT CTCGGGAACG GATGTGACAA ATGGAACATT CAACGAAGAT
TACACGGTCA CTATTCCGGA AGCCTGTTCC AAAGCGGGTG ATCGGCTGTA TTTACACCCC
ATGCTGACAG AGGGCCGCAG CGTCAATCCG TTTCGGGAAA CGGAGCGGCT TTACCCGGTT
GACTTTGGGG TGCTGATCGA TGAGACGTTC TCGGCTACCT ATATACTTCC CAGGGGATTT
CAGGTTGAGG AGATGCCCAA AGCGGTGTCG ATGGTTTTGC CGGAGAATGG CGGACGATTT
ATGTATCAGG TAGTGGCCGA TGGCGATATT CTTCAGATCA TAAGTCGGAT TTCGCTACGC
CGGACACAGT ATTTTGCCGG AGAATATGGC CCGCTGCGGG AATTGTTTAG TAAAATTGTT
GCCAAACATG CCGAACAGAT CGTTCTGAAA CGGGTGACTG TCGCTGAAAA GAAATAG
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| Protein sequence | MFSFLAYRHF PLPMILCLCF GLSVGLAQSA KEPDPAPVVK FGKISPDQFL TSSADSTAEA
IVLYDYGEVT FENGSSELWM VSKFHVRVQI RKKSAYDRAT IELLTRRGKS GQHELVSDFD
GYTYNLTKGD VSIDRLTKAG HFTEKATDQF WIEKYTLPNV REGSIVDYQY TIRTPFGVSY
NPKTWRFQQD VPVKWSEYRI TIPDYFFYKV LQSGYIEMTV NKRESKTTDL FPGQPTASAS
AYRFAMKDVP AFRNEAYITT ANDYMAKIEF ELASYQVPSA TGFISKNIAV GWDAMDKTLL
DDPDFGGQIN RTGFLRETAK ALTGQGTDTL SRIKAAYNFI RQSIKWNDEA SYWSKSIKKV
FDAKKGDAGD INLMLIALLR EMDIDANPVI LSTRSHGRIN ESYALLKKFN YVVAHVSVGG
KDVLLDATDP YLLPGMLPSH CLNGTGRLVH PTKARFLSLL PTERDVEVYN TRLVIDSNGD
LSGSLSHSHG GYSAWSSRKL FAAVGKAKYL EGIQKEHASW QIEKAEFSGT DVTNGTFNED
YTVTIPEACS KAGDRLYLHP MLTEGRSVNP FRETERLYPV DFGVLIDETF SATYILPRGF
QVEEMPKAVS MVLPENGGRF MYQVVADGDI LQIISRISLR RTQYFAGEYG PLRELFSKIV
AKHAEQIVLK RVTVAEKK
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