Gene Slin_0307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0307 
Symbol 
ID8724035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp397107 
End bp397667 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content45% 
IMG OID 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003385170 
Protein GI284035240 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAC AAACAGTACC TAATAGCCCC GTAACTACAG AAACTGACCA TCTCTCGATT 
TGTAATCTGG AGAGCTTCGA AATCCTTTAT AGCAACTACG CCAGTAAAAT CCACCAAAAA
TGTCTGACGA TGATCAATGA CGACGAAACC GCCAAAGATT TTACGCAGGA TATTTTTCTT
AAAGTATTTA CCAAACTCCA TACGTTTCAG AACCGGGCCT CGTTTGCCAC CTGGATTTAT
GCCATTGCGC ATAACTACTG CCTGGATCAG ATCAGGATCA GCAAACGGTT CAGCCGGGAA
TCGCTATCGG ATGATCTGAT CGGCGAATTA CCCGAAAGTG ACAACCAGGA GACCGAGGTC
GCTCGACTCC ATGTTCTGGA ACTTCTCATG AAGGAATTAC CCATTCATGA GGTAACCATG
TTACGGCTTA AGCACGAGCA GGGTTTAAGT GTCAAAGCCA TCAGCGAACG GTACCAACTA
TCCGAAAGCG CCGTAAAAAT GCGCCTTAAA CGAACAAGGG ATAAGATACA AAGCCTGTTG
GACAACCAGT GCTACGCCTA A
 
Protein sequence
MKKQTVPNSP VTTETDHLSI CNLESFEILY SNYASKIHQK CLTMINDDET AKDFTQDIFL 
KVFTKLHTFQ NRASFATWIY AIAHNYCLDQ IRISKRFSRE SLSDDLIGEL PESDNQETEV
ARLHVLELLM KELPIHEVTM LRLKHEQGLS VKAISERYQL SESAVKMRLK RTRDKIQSLL
DNQCYA