Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0258 |
Symbol | |
ID | 8723986 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 340950 |
End bp | 341582 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003385122 |
Protein GI | 284035192 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.125202 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0142771 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACTTTT TACGCAAATA CTGGTATGAC CTTGCTGGCA TTTTAGCCGT TATTACCTTC ACTGGTTTAT TCATTTTTCA CAATTCATTG ACAAACTATC AAATCTTGAT GTGGCTCAGT TTAGTTACAT TATTTCTCCA TCAGCTTGAG GAGTATAGAA TAGTTGGAAC TTTCCCAGGC ATGGTAAACA AAGCAATGTA TAATAGTGAT GCACCTGACA GATACCCCCT AAATACAAAT ACTGCATTTT ATGTGAATGT TGTAATCGGT TGGGGCTTTT ATCTACTTGC AGCAATACTT GGTGAAAAAG CGGTTTGGCT AGGTATTGCC ACAATATTAG TATCACTAGG CAATACAGTT GCACACACTA CTGTATTCAA TATAAAGGGT AAGACACTCT ATAATGCAGG CCTTGCTACA TGTTGGTCGT TGTTTGTCCC TTGTATATAT TTTTTCATTA CGACAATTTA CAAAGAGAAT TTAGTATCAA TTACTGACTA TTTAATTGGC ATTCCATTGG GTGTTGTCTT AAATGTAGTG GGAATTCTAA AACTTATTGA CTGGCTTGCT GACAAAAATA CCAATTATAT TTTTGAACAG AGAAACTTAC TTCCCAAAGA CAGGAAGAAA TAA
|
Protein sequence | MDFLRKYWYD LAGILAVITF TGLFIFHNSL TNYQILMWLS LVTLFLHQLE EYRIVGTFPG MVNKAMYNSD APDRYPLNTN TAFYVNVVIG WGFYLLAAIL GEKAVWLGIA TILVSLGNTV AHTTVFNIKG KTLYNAGLAT CWSLFVPCIY FFITTIYKEN LVSITDYLIG IPLGVVLNVV GILKLIDWLA DKNTNYIFEQ RNLLPKDRKK
|
| |