Gene Slin_0258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0258 
Symbol 
ID8723986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp340950 
End bp341582 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content35% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003385122 
Protein GI284035192 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.125202 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0142771 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTTTT TACGCAAATA CTGGTATGAC CTTGCTGGCA TTTTAGCCGT TATTACCTTC 
ACTGGTTTAT TCATTTTTCA CAATTCATTG ACAAACTATC AAATCTTGAT GTGGCTCAGT
TTAGTTACAT TATTTCTCCA TCAGCTTGAG GAGTATAGAA TAGTTGGAAC TTTCCCAGGC
ATGGTAAACA AAGCAATGTA TAATAGTGAT GCACCTGACA GATACCCCCT AAATACAAAT
ACTGCATTTT ATGTGAATGT TGTAATCGGT TGGGGCTTTT ATCTACTTGC AGCAATACTT
GGTGAAAAAG CGGTTTGGCT AGGTATTGCC ACAATATTAG TATCACTAGG CAATACAGTT
GCACACACTA CTGTATTCAA TATAAAGGGT AAGACACTCT ATAATGCAGG CCTTGCTACA
TGTTGGTCGT TGTTTGTCCC TTGTATATAT TTTTTCATTA CGACAATTTA CAAAGAGAAT
TTAGTATCAA TTACTGACTA TTTAATTGGC ATTCCATTGG GTGTTGTCTT AAATGTAGTG
GGAATTCTAA AACTTATTGA CTGGCTTGCT GACAAAAATA CCAATTATAT TTTTGAACAG
AGAAACTTAC TTCCCAAAGA CAGGAAGAAA TAA
 
Protein sequence
MDFLRKYWYD LAGILAVITF TGLFIFHNSL TNYQILMWLS LVTLFLHQLE EYRIVGTFPG 
MVNKAMYNSD APDRYPLNTN TAFYVNVVIG WGFYLLAAIL GEKAVWLGIA TILVSLGNTV
AHTTVFNIKG KTLYNAGLAT CWSLFVPCIY FFITTIYKEN LVSITDYLIG IPLGVVLNVV
GILKLIDWLA DKNTNYIFEQ RNLLPKDRKK