Gene Slin_0233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0233 
Symbol 
ID8723961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp311977 
End bp312588 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content47% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003385097 
Protein GI284035167 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0742289 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAC TGGTATATAC CTGCCTGATT CTGTTGACGT GCCTAACACG GATAATGGCT 
CAAACCGAGA AAGGACGCTG GACCGCTGGC GCCACCGTTG GGAATTTTAC GTATAGCAAG
AAAGATGCGT ATCGTTCGTT TTCGGCTAGT TTAACCCCAT TAGCGGGCTA TTTCGTAGCA
AATAATCTGG AGGTTGGTAC AGGTGTGCCC CTTAGCGTAA ACACGAGTAA ATACGTTAAT
CCGAACGGGG ATGCAAAGAA TAGCGGTACC TCTATTGGGC TGTCTCCTTA CGTGCGCTAT
TATTTCGGAC CTGCTAAACT AAAGCCTTTT GTTGGTCTGG CGTATGGCTA CTCCTGGACG
AGTATACGCA ATCGTGATTC AGGCCAGGAT ACTAAGGGTA AGGGCTTTAC GTCTACACTA
ACGCCAACCG TTGGCGTCGC TTACTTTATC AATCGCTCTG TTGCCTTAAA TGCCAGTCTG
AATTATATCT CGCAGAGATA CAGGACAGCC TATGTCAGTT ATAACAGCGG TGGTACTCCG
ATAGAGGTTC CCGTGTCAAC GAGCAACTAC ATGAGTTTGG GTATTGGCTT TCAGATATTT
CTGGGTCAAT AA
 
Protein sequence
MKTLVYTCLI LLTCLTRIMA QTEKGRWTAG ATVGNFTYSK KDAYRSFSAS LTPLAGYFVA 
NNLEVGTGVP LSVNTSKYVN PNGDAKNSGT SIGLSPYVRY YFGPAKLKPF VGLAYGYSWT
SIRNRDSGQD TKGKGFTSTL TPTVGVAYFI NRSVALNASL NYISQRYRTA YVSYNSGGTP
IEVPVSTSNY MSLGIGFQIF LGQ