Gene Slin_0159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0159 
Symbol 
ID8723887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp199779 
End bp200711 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content54% 
IMG OID 
ProductTatD-related deoxyribonuclease 
Protein accessionYP_003385024 
Protein GI284035094 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0719337 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000000886366 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATTTTA TGGATTCAAT TCGTGGCATG TCGTTTTTCG ATATGCACGT CCACATGACG 
TCCCGTACCA CAGACGACTA TCAGGCGATG GCCGACGCGG GCGTAGTAGC CCTGATCGAA
CCGGCTTTCT GGCTTGGACA GCCCCGCACG GGCGTCGACT CATTCCGGGA TTATTTCGCC
AGTCTGGTAG GCTGGGAGCG ATTTCGGGCG TCGCAGTTCG GTATCCGGCA CTATTGTACC
ATCGGATTGA ACTCCAAAGA GGCTAATCAA GAAGAATTAG CGGAGCAGGT TATGGAAATC
CTGCCGTTAT TCATCTACAA AGAAGGCGTG GTTGGTGTAG GTGAAATTGG CTTTGATGAC
CAGACGCCCG CCGAGGATAA ATACTACCGG GCACAACTGG AACTGGCCCG GGAAGCCGGA
TTACCCGTAC AGATTCACAC GCCCCACCGC GATAAAAAAC AGGGCACCAG CCGGAGTATG
GACATCGCCA TCGAGCATGG CATCGACCCC GGCATGGTGA TCGTTGACCA TAATAATGAG
GAAACGGTGC GTGAGGTGCT GGACCGTGGT TTCTGGGCAG GCTTCACCAT TTATCCGTTT
ACCAAGATGG GCAACGAGCG CATGGTTGAG GTGGTAAAGC AGTACGGACC GGAGCGCATC
ATGATCAACT CGGCCGCCGA CTGGGGCATC AGCGACCCGC TGGCTGTACC CAAAACGGCT
GCATTGATGA AGCAGCGTGG TATTTCGGAC GAGGCTATCA AACTAGTGAC CTTTACCAAT
GCTGTAACAG CCTTTGCCCA AAGCGGTCAG CTTAGCCTCG AAGAACTCAC CCAGCCCATG
GGTATCGACC AGAGCCAGCG CTACAACGGC AGTTCGGTAC TACGGGGCGG ACAGGCACCG
AGAGTGGACA AGGAATCGAC GATAATTAAA TAA
 
Protein sequence
MDFMDSIRGM SFFDMHVHMT SRTTDDYQAM ADAGVVALIE PAFWLGQPRT GVDSFRDYFA 
SLVGWERFRA SQFGIRHYCT IGLNSKEANQ EELAEQVMEI LPLFIYKEGV VGVGEIGFDD
QTPAEDKYYR AQLELAREAG LPVQIHTPHR DKKQGTSRSM DIAIEHGIDP GMVIVDHNNE
ETVREVLDRG FWAGFTIYPF TKMGNERMVE VVKQYGPERI MINSAADWGI SDPLAVPKTA
ALMKQRGISD EAIKLVTFTN AVTAFAQSGQ LSLEELTQPM GIDQSQRYNG SSVLRGGQAP
RVDKESTIIK