Gene Slin_0140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0140 
Symbol 
ID8723868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp171845 
End bp172984 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content54% 
IMG OID 
ProductFIST C domain protein 
Protein accessionYP_003385009 
Protein GI284035079 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAA AACAAGAACT ATTCACGGGT ACGAGTTGGA AAACACTCTC AGAAGCTGAC 
GGCTTTAAGG CCGCTGCATC ACAGTTGGTT CTGGCTTTTG GAGAGCGGGT CCTGCTCAGC
AATACCGATG TTTATGGGCA GCTTCGGGAC CGATACCCAA CTGCCGCTAT TGTAATGAAC
TCCACGGCTG GCGAAATCTT CAGCGATCAT GTGGCCGACG ATACCATTGT CGTTACAGCC
ATTGCTTTCG AAAAAACCAC GGTCCGGACG GTACAGATCG ACATCGAGAA CTACCAGGAG
AGCTACCGGG CTGGCCAGAA GATCGCTGAG GCACTGGACG ATCCGGCGCT GGCCGCGTTG
TTTATTGTAT CGGATGGCAG TTGGGTGAAT GGCAGTAAGC TGATCGATGC GCTGAATGAC
TGCCTGCACC GCGTCGTTCC GATTACAGGC GGGCTGGCAG GCGATGCAAC ACGGTTCGCA
TCTACGCTGG TCGGGCTTAA TGAGCCGCCA ACAACCGGTA AAATTGTGGG TATTGGCTTT
TACGGCGATA GTCTTTGCGT AGGTACCAGT TCTATGGGTG GGTGGGATGT CTACGGACCC
GAACGGGAGG TGACGCGTTC AGAATACAAT GTACTGTTTC AGATTGGCGA TACCCTGGCG
CTCGATCTAT ATCAGGATTA TCTGGGTAAA TACGCCGAGG GCTTACCTTC GGCTGCTTTA
TTCTTCCCGC TATCTATGCG AACCACGGCC GATTCACCCC CACTGGTGCG CACAATCCTG
TCTATTGATG AAGCCGCCCG TAGCATGACC TTCGCCGGGG ACATGCCCGA AAAAAGCCTG
GTGCGCTTTA TGACGGCTAA CCTCGACCGC ATCATTGAAG CGGCTGCTAC GGCTGCGCAC
ACGGCTATGT CAACACTTAC GCTAACACCC GAACTGGTCA TTCTGGTGAG TTGCGTGGGG
CGAAAGCTGG TGTTGGGGCA GCGCATCGAT GAAGAAGTGG AAGCCGTTCG GGATGTCTTT
GGTGAGGCCA CCGTGCTCAG TGGATTTTAT TCGTACGGCG AAATTGCCCC TACTGCACCC
GGTGCCCGGT GCGAACTCCA TAACCAAACA ATGACCATTA CCGCCTTTTC GGAGCAATAA
 
Protein sequence
MKIKQELFTG TSWKTLSEAD GFKAAASQLV LAFGERVLLS NTDVYGQLRD RYPTAAIVMN 
STAGEIFSDH VADDTIVVTA IAFEKTTVRT VQIDIENYQE SYRAGQKIAE ALDDPALAAL
FIVSDGSWVN GSKLIDALND CLHRVVPITG GLAGDATRFA STLVGLNEPP TTGKIVGIGF
YGDSLCVGTS SMGGWDVYGP EREVTRSEYN VLFQIGDTLA LDLYQDYLGK YAEGLPSAAL
FFPLSMRTTA DSPPLVRTIL SIDEAARSMT FAGDMPEKSL VRFMTANLDR IIEAAATAAH
TAMSTLTLTP ELVILVSCVG RKLVLGQRID EEVEAVRDVF GEATVLSGFY SYGEIAPTAP
GARCELHNQT MTITAFSEQ