Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_0140 |
Symbol | |
ID | 8723868 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 171845 |
End bp | 172984 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | FIST C domain protein |
Protein accession | YP_003385009 |
Protein GI | 284035079 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATAA AACAAGAACT ATTCACGGGT ACGAGTTGGA AAACACTCTC AGAAGCTGAC GGCTTTAAGG CCGCTGCATC ACAGTTGGTT CTGGCTTTTG GAGAGCGGGT CCTGCTCAGC AATACCGATG TTTATGGGCA GCTTCGGGAC CGATACCCAA CTGCCGCTAT TGTAATGAAC TCCACGGCTG GCGAAATCTT CAGCGATCAT GTGGCCGACG ATACCATTGT CGTTACAGCC ATTGCTTTCG AAAAAACCAC GGTCCGGACG GTACAGATCG ACATCGAGAA CTACCAGGAG AGCTACCGGG CTGGCCAGAA GATCGCTGAG GCACTGGACG ATCCGGCGCT GGCCGCGTTG TTTATTGTAT CGGATGGCAG TTGGGTGAAT GGCAGTAAGC TGATCGATGC GCTGAATGAC TGCCTGCACC GCGTCGTTCC GATTACAGGC GGGCTGGCAG GCGATGCAAC ACGGTTCGCA TCTACGCTGG TCGGGCTTAA TGAGCCGCCA ACAACCGGTA AAATTGTGGG TATTGGCTTT TACGGCGATA GTCTTTGCGT AGGTACCAGT TCTATGGGTG GGTGGGATGT CTACGGACCC GAACGGGAGG TGACGCGTTC AGAATACAAT GTACTGTTTC AGATTGGCGA TACCCTGGCG CTCGATCTAT ATCAGGATTA TCTGGGTAAA TACGCCGAGG GCTTACCTTC GGCTGCTTTA TTCTTCCCGC TATCTATGCG AACCACGGCC GATTCACCCC CACTGGTGCG CACAATCCTG TCTATTGATG AAGCCGCCCG TAGCATGACC TTCGCCGGGG ACATGCCCGA AAAAAGCCTG GTGCGCTTTA TGACGGCTAA CCTCGACCGC ATCATTGAAG CGGCTGCTAC GGCTGCGCAC ACGGCTATGT CAACACTTAC GCTAACACCC GAACTGGTCA TTCTGGTGAG TTGCGTGGGG CGAAAGCTGG TGTTGGGGCA GCGCATCGAT GAAGAAGTGG AAGCCGTTCG GGATGTCTTT GGTGAGGCCA CCGTGCTCAG TGGATTTTAT TCGTACGGCG AAATTGCCCC TACTGCACCC GGTGCCCGGT GCGAACTCCA TAACCAAACA ATGACCATTA CCGCCTTTTC GGAGCAATAA
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Protein sequence | MKIKQELFTG TSWKTLSEAD GFKAAASQLV LAFGERVLLS NTDVYGQLRD RYPTAAIVMN STAGEIFSDH VADDTIVVTA IAFEKTTVRT VQIDIENYQE SYRAGQKIAE ALDDPALAAL FIVSDGSWVN GSKLIDALND CLHRVVPITG GLAGDATRFA STLVGLNEPP TTGKIVGIGF YGDSLCVGTS SMGGWDVYGP EREVTRSEYN VLFQIGDTLA LDLYQDYLGK YAEGLPSAAL FFPLSMRTTA DSPPLVRTIL SIDEAARSMT FAGDMPEKSL VRFMTANLDR IIEAAATAAH TAMSTLTLTP ELVILVSCVG RKLVLGQRID EEVEAVRDVF GEATVLSGFY SYGEIAPTAP GARCELHNQT MTITAFSEQ
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