Gene Slin_0136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0136 
Symbol 
ID8723864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp160708 
End bp161385 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content51% 
IMG OID 
ProductHAD-superfamily hydrolase, subfamily IA, variant 3 
Protein accessionYP_003385005 
Protein GI284035075 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAATA AACCAAACAC ACCCGTATTG ATTTTCGATA TGGACGGGAC ATTAATTGAC 
AGTAACCCGG CCCACAAGCT AGCTTATACG GAATTTCTCA AACGACATGG TATCGAACTG
ACCGATGCCG ATTTTATCGA CTATATATCG GGGCGAATGA ACCCCGATGT TATCAAGCAC
TTTTTCGGCG ACGACACGGA CGCTGAACGC ATTCAGGAAC TGACGAAGGA AAAGGAAACT
CTTTTTCAGG ATATATACGG GCCGCAGATC AAGGCTATCG ACGGGTTGAT GCCATTTCTG
AACAGCGTTC GTGAAGCTGG ATTTTTGATG GTTCTGGCCA CTTCAGCGCC CATGATGAAC
GTCCGGTTCG TGTTCGACCA TCTGCCCATC GAGCAATTTT TTGTCACAAT CATTTCAGAG
CAGGACGTTG AGGTTGGTAA ACCCGACCCA ACCGTATTCC GCCGGGCGGC CGAACGCGTG
ATGGCCCAAC CGGCAGACTG CCTCGTTTTT GAAGACTCCC AGGCCGGTGT GCAGGCCGCT
CATGAGGCAG GAATGAAAGT AATTGTGCTA ACAACCACCC ACACGGCCGA TGAGTTGGGC
GACGCCGAAC TGGCCATCGG CGATTTCACA CAGGTGTCGG TTGCCCATCT GCGCCAAATC
ATGCAGCCAG CTGCATAA
 
Protein sequence
MENKPNTPVL IFDMDGTLID SNPAHKLAYT EFLKRHGIEL TDADFIDYIS GRMNPDVIKH 
FFGDDTDAER IQELTKEKET LFQDIYGPQI KAIDGLMPFL NSVREAGFLM VLATSAPMMN
VRFVFDHLPI EQFFVTIISE QDVEVGKPDP TVFRRAAERV MAQPADCLVF EDSQAGVQAA
HEAGMKVIVL TTTHTADELG DAELAIGDFT QVSVAHLRQI MQPAA