| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0118 |
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| Symbol | |
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| ID | 8723846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 144640 |
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| End bp | 146166 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | GH3 auxin-responsive promoter |
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| Protein accession | YP_003384989 |
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| Protein GI | 284035059 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.086469 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGTTA TTGGGGAGTT AATCAAAAAA GCAATTGATG TTTATGGGTT TGTTACGTCG
GAGCCTGACC CGGCAAAAGC CCAGCGGGAG GTACTGCAAA ACCTGCTGAC AAAAGCACGG
CTAACGGCCT TTGGTAAGAA ACACAACTTC ACCGAACTGC TCCGTAGCGA CGACATAGTT
GCCGCTTTTC AGCAGGAGGT TCCCGTCCAT GATTATGATA AACTGCATAC CGATTGGTGG
CATTACCTGC TCGAAGGACA CCAGAATGTG ACCTGGCCCG GCGGACAGCG TTATTTTGCG
CTCAACAGTG GAACCACCAG CACCAGCAAG GCCATTCCGG TAACGGACGA CATGATCGAC
GCGATCCGTA AATCGGGTAT TCAGCAGGTC ATGAGCCTGA AAAACTTCGA CCTCCCGTCC
GATTTTTTCC AGAAGCAGAT CCTGATGCTG GGCAGCAGCA TCAACCTGAT CGAAAAAGAC
GACCACGAGG AGGGAGAAAT CAGCGGCATC AGCGCGGCTA ATATCCCGGC CTGGTTCCGG
GGGTATTACA AACCGGGGAT CGAGATTGCT TCCCTCACCG ACTGGGACGA AAAGGTACAC
CAGATCGCTA AAGAAGCGCC CACCTGGGAC ATCGGCAGCC TGAGCGGTAT TCCGTCATGG
ATAGAAATGA TGCTGAAAGA GGTGGTCCGG TATAACCGGC TGAGCACCAT TCACGACATA
TGGCCCAACC TGCACGTTTA TACTTCGGGT GGTGTGGCTT TTGAGCCGTA CCGCAAAAGC
CTCGAAACCT TACTGGCCCG GCCGCTCACC TACATCGACA CCTACCTGAC CTCGGAAGGG
TATCTGGCTA CGCAAAAACG CCCCGACACC TCGTCGATGG CGCTGATCGT CGACAATGGC
ATTTTCTTCG AATTTGTCCC GTTTGTGGAC GAGAATATGG ACGATGAGGG GCGCGTAAAG
CCCGACGCCA CTGTTCTTTC GCTGGAACAG GCGGAAGAAA ATGTCGATTA CGTATTACTG
ATCTCGACTG TTTCGGGCAC CTGGCGCTAC ATGATTGGCG ATACGGTCAT GCTTACCGAC
AAGCAGCGGG CCGAGATAAA AATTACCGGC CGGACGAAGC ATTTTCTGAA TGTCGTGGGT
GAACAGCTGT CGGTGCATCA GATGAATAAG GCCATGCAGA CCATGCAAAA ACGCTTCGAC
GTGGAGATTA AAGAGTTTGT CGTATCGGCC ATCCGCAAAG ACGGGGAGCA TATCAACAAA
TGGTACATCG GTGCCAATAA AGAGGTCGAC GGTGCTGAAA TGGCCGCTGC GCTGGACAGC
GAACTGTGCG ACAACAACAA AAATTACAAA GTGGCCCGGA GCAAATCACT GAAAGGGGTC
GAAGCGGAAG TGATTCCGGT CGAGAAGTTT TACCGCTGGA GCGAGGAGTT CAAAAAACTG
GGCGGTCAGG CCAAAATTCC CCGCGTGATG AAGGAAGAAG ATTTTCTGGG GTTTGAGCAG
TACATACAAA GCCTGCCCTA TAGCTAG
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| Protein sequence | MAVIGELIKK AIDVYGFVTS EPDPAKAQRE VLQNLLTKAR LTAFGKKHNF TELLRSDDIV
AAFQQEVPVH DYDKLHTDWW HYLLEGHQNV TWPGGQRYFA LNSGTTSTSK AIPVTDDMID
AIRKSGIQQV MSLKNFDLPS DFFQKQILML GSSINLIEKD DHEEGEISGI SAANIPAWFR
GYYKPGIEIA SLTDWDEKVH QIAKEAPTWD IGSLSGIPSW IEMMLKEVVR YNRLSTIHDI
WPNLHVYTSG GVAFEPYRKS LETLLARPLT YIDTYLTSEG YLATQKRPDT SSMALIVDNG
IFFEFVPFVD ENMDDEGRVK PDATVLSLEQ AEENVDYVLL ISTVSGTWRY MIGDTVMLTD
KQRAEIKITG RTKHFLNVVG EQLSVHQMNK AMQTMQKRFD VEIKEFVVSA IRKDGEHINK
WYIGANKEVD GAEMAAALDS ELCDNNKNYK VARSKSLKGV EAEVIPVEKF YRWSEEFKKL
GGQAKIPRVM KEEDFLGFEQ YIQSLPYS
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