Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_37080 |
Symbol | |
ID | 8635341 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 4141006 |
End bp | 4141644 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | transcriptional regulator |
Protein accession | YP_003316428 |
Protein GI | 269796973 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACGACG ACCAGGTCGC GGTCGGCCGG AGGGCTCGGG CCAAGCAGGA CAAGCACCAG CGCATCCTCG AGGCGGCCCG CGGCCTCTTC GCCGAGCTCG GTGTCAGCAC CGTCACCACC CAGCAGGTCG CCGACCGTGC CGACGTCGCC ATCGGCACGC TGTTCCGCTA CGCCTCGACC AAGGCCGAGC TGCTGATCAT GGTGCAGAAC GAGAAGTTCG CCGCCGCCAT CCAGGAGGGG CTCGCCGCCG GCGAGCGGGC CGGACCGCAG GGAGCCGTGG ACGACGTGCT CACGCTCCTC CGCCCCGTGG TGGCGTGCGT GCGTGAGCAC GTCGAGAACG GACGGACCTA CCTGCACGAG CTCGTCGTCG GCGACCCCGA GGAGCCCTAC CGGCAGGCCG GGCTCGAGCT GTCGGCCAGG CTCGAGGCCG GGGTCGCCGC GACGCTCGTC CGGGCCAGGG ACGTCACGCC AGGGGACGCA GGCACGCTGG CGCGTGTGGT GTCAGCCGTG CTCCACCTCT CGCTGACCGC GACCCTCACG GACGGCACGA GCCTCGACGA CGTGCTCGCC GACATCCGCG CACAGCTCAG GGCGGTCCTC GACCCGCTGG CCCCGGCCGT GGGACGTCGG GCAGTGTGA
|
Protein sequence | MDDDQVAVGR RARAKQDKHQ RILEAARGLF AELGVSTVTT QQVADRADVA IGTLFRYAST KAELLIMVQN EKFAAAIQEG LAAGERAGPQ GAVDDVLTLL RPVVACVREH VENGRTYLHE LVVGDPEEPY RQAGLELSAR LEAGVAATLV RARDVTPGDA GTLARVVSAV LHLSLTATLT DGTSLDDVLA DIRAQLRAVL DPLAPAVGRR AV
|
| |