Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_36820 |
Symbol | |
ID | 8635315 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | - |
Start bp | 4116320 |
End bp | 4116973 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | uncharacterized protein, copper resistance protein CopC-like protein |
Protein accession | YP_003316402 |
Protein GI | 269796947 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00403371 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.543816 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAGCA CCTCCGTCCG CACCCGCCGC CGCACCGCAC CGCGCGCGCT CCTCGTCGGC CTGCTCTCGG CGGTCGCGCT GGTCCTCGGC GGCACGACCG CGTCGGCCCA CGACACCGTC CTCGGCACGG CGCCCGGCGA CGGCGAGACG CTCACGACGG CCCCGACGCA GGTGTCGGTC GAGCTGAGCG CGGTCCCGCA GGCCATCGGG TCCCGGATGC TCGTGACGTC CTCCGACGGC ACGGTGCTCT TCGACGGCGA GCCGACCATC GCCGACCGCG TCGCGAGCGT CGAGCTCCCC GCCGTCGCGA ACGACGGCTA CACGGTCGCG TGGCGCCTCG TCTCCTCTGA CGGGCACCCG ATCGACGGCA CCTTCGGGTT CGTCGTCGAC GACCCGGCCG CGGTCGCGCC GACCGAGGAC CCCACCATGG AGACCCAGGG CGAGACCGAC GCGACGACCG ACGCCGAGAC CTCCGAGGCA GCGACCGCGA CCACCGACGC CTCGGACCCG TCGCCCTCGG CCACCGACGC CGCCTCGGAC GAGGACTCCT CGGGCACGTC GTGGCTGCCG GTCGCCGGCG TCGTCGTGGT CGTCGTGGGA CTCGTCCTCC TCGTGCTCTT CCGCCGCCGC TCCGCCCTCC AGGACCAGTC CTGA
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Protein sequence | MTSTSVRTRR RTAPRALLVG LLSAVALVLG GTTASAHDTV LGTAPGDGET LTTAPTQVSV ELSAVPQAIG SRMLVTSSDG TVLFDGEPTI ADRVASVELP AVANDGYTVA WRLVSSDGHP IDGTFGFVVD DPAAVAPTED PTMETQGETD ATTDAETSEA ATATTDASDP SPSATDAASD EDSSGTSWLP VAGVVVVVVG LVLLVLFRRR SALQDQS
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