Gene Sked_36820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_36820 
Symbol 
ID8635315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp4116320 
End bp4116973 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content75% 
IMG OID 
Productuncharacterized protein, copper resistance protein CopC-like protein 
Protein accessionYP_003316402 
Protein GI269796947 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00403371 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.543816 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGCA CCTCCGTCCG CACCCGCCGC CGCACCGCAC CGCGCGCGCT CCTCGTCGGC 
CTGCTCTCGG CGGTCGCGCT GGTCCTCGGC GGCACGACCG CGTCGGCCCA CGACACCGTC
CTCGGCACGG CGCCCGGCGA CGGCGAGACG CTCACGACGG CCCCGACGCA GGTGTCGGTC
GAGCTGAGCG CGGTCCCGCA GGCCATCGGG TCCCGGATGC TCGTGACGTC CTCCGACGGC
ACGGTGCTCT TCGACGGCGA GCCGACCATC GCCGACCGCG TCGCGAGCGT CGAGCTCCCC
GCCGTCGCGA ACGACGGCTA CACGGTCGCG TGGCGCCTCG TCTCCTCTGA CGGGCACCCG
ATCGACGGCA CCTTCGGGTT CGTCGTCGAC GACCCGGCCG CGGTCGCGCC GACCGAGGAC
CCCACCATGG AGACCCAGGG CGAGACCGAC GCGACGACCG ACGCCGAGAC CTCCGAGGCA
GCGACCGCGA CCACCGACGC CTCGGACCCG TCGCCCTCGG CCACCGACGC CGCCTCGGAC
GAGGACTCCT CGGGCACGTC GTGGCTGCCG GTCGCCGGCG TCGTCGTGGT CGTCGTGGGA
CTCGTCCTCC TCGTGCTCTT CCGCCGCCGC TCCGCCCTCC AGGACCAGTC CTGA
 
Protein sequence
MTSTSVRTRR RTAPRALLVG LLSAVALVLG GTTASAHDTV LGTAPGDGET LTTAPTQVSV 
ELSAVPQAIG SRMLVTSSDG TVLFDGEPTI ADRVASVELP AVANDGYTVA WRLVSSDGHP
IDGTFGFVVD DPAAVAPTED PTMETQGETD ATTDAETSEA ATATTDASDP SPSATDAASD
EDSSGTSWLP VAGVVVVVVG LVLLVLFRRR SALQDQS