Gene Sked_36080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_36080 
Symbol 
ID8635241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp4036872 
End bp4038200 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content74% 
IMG OID 
Productglutamate-1-semialdehyde 2,1-aminomutase 
Protein accessionYP_003316328 
Protein GI269796873 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00323277 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGACG ACGCAGCGAA CCACCTGGCC TTCGAGCGCG CCCGGCTGGT GCTGCCGGGC 
GGGGTGAACT CCCCCGTCCG CGCCTACGGC TCTGTCGGCG GAGACCCCCG CTTCGTCTCG
TCGGCCTCCG GGCCGTACAT CCGCGACGTC ACCGGGACCG AGTACGTCGA CCTCGTGTGC
TCCTGGGGCC CGGCGCTCCT GGGGCACGCG CACCCGGCCG TCGTCGAGGC GGTGCAGGAG
GCCGCAGCCC GTGGCCTGTC CTTCGGGGCG CCGACGCTCG GCGAGGTCGA GCTCGCCGAG
GAGATCCGCC GCCGCGTCCC CGCCGCCGAG CACGTCCGGC TCGTGTCGAC GGGCACCGAA
GCGACCATGA CGGCCGTGCG TCTCGCCCGC GGTGCGACGG GACGACCGCT CATCGTGAAG
TTCGCCGGCT GCTACCACGG GCACGTCGAC TCGCTCCTGG CCGAGGCCGG GTCGGGCGTC
GCCAACCAGG CCCTGCCCGG CTCAGCCGGT GTCACCGAGG CGACGGCGTC GGAGACCCTC
GTGCTCCCGT ACAACGACCT CGCGGCCGTC GAGCAGGTGT TCGCCGAGCG CGGCAGCGAG
ATCGCCGCCG TGATCACCGA GGCCGCCCCC GCCAACATGG GGATCGTCCC ACCGCTCCCC
GGGTTCAACG AGGGCCTGCG CCGCATCACC ACCGCGCACG GCGCGCTGCT GATCTTCGAC
GAGGTGCTCA CCGGGTTCCG CGTGAGCGCG AGCGGCTGGT GGGGCTACGA GACCACGACC
CTCGGCGCCG ACTTCACGCC CGACCTCTTC ACCTTCGGCA AGGTCGTCGG CGGCGGCATG
CCCGTCGCCG CGATCGGCGG GCCGTCCGTG CTCATGGACC TCCTCGCGCC GCTCGGCCCC
GTCTACCAGG CCGGCACGCT CTCCGGGAAC CCCGTCGCCG TCGCGGCCGG GCGGGCCACC
CTCGCCGCCG CCGACGCCTC CGTGTACGCG CGGGTCGACG AGGTGTCGAC GATCGTCGCC
GACGCGACGA GCGCCGCGCT CTCGGCCGAG GGCGTCGCCC ACCGGGTGCA GCGCTCGGGC
AACCTGTTCT CCGTGATGTT CGGGGACCTC GCCCAGGAGG TCGGCACCCG CACCTACGCC
CAGGTGCAGG CCTCCGACAC CTTCCGCTAC CCGCCGTTCT TCCACGCGAT GCTCGACGCA
GGGGTGAACC TCCCGCCGTC CGTCTACGAG GCCTGGTTCG TCTCGGCAGC CCACGACGAC
ACCGCCGTCG ACCGGATCCT CGACGCGCTG CCCGGTGCGG CGAAGGCCGC CGCCGCAGCG
CGCGCGTAG
 
Protein sequence
MHDDAANHLA FERARLVLPG GVNSPVRAYG SVGGDPRFVS SASGPYIRDV TGTEYVDLVC 
SWGPALLGHA HPAVVEAVQE AAARGLSFGA PTLGEVELAE EIRRRVPAAE HVRLVSTGTE
ATMTAVRLAR GATGRPLIVK FAGCYHGHVD SLLAEAGSGV ANQALPGSAG VTEATASETL
VLPYNDLAAV EQVFAERGSE IAAVITEAAP ANMGIVPPLP GFNEGLRRIT TAHGALLIFD
EVLTGFRVSA SGWWGYETTT LGADFTPDLF TFGKVVGGGM PVAAIGGPSV LMDLLAPLGP
VYQAGTLSGN PVAVAAGRAT LAAADASVYA RVDEVSTIVA DATSAALSAE GVAHRVQRSG
NLFSVMFGDL AQEVGTRTYA QVQASDTFRY PPFFHAMLDA GVNLPPSVYE AWFVSAAHDD
TAVDRILDAL PGAAKAAAAA RA