Gene Sked_32110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_32110 
Symbol 
ID8634844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3573424 
End bp3574458 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content79% 
IMG OID 
ProducttRNA(Ile)-lysidine synthetase 
Protein accessionYP_003315941 
Protein GI269796486 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGGCC CGCCGCAGGC GGTCGCCCGG GCCAGACGGG CGGTCCGCGC GACCCTCGAG 
ACCGTCGCCG CCGAGCACCC GGGAGCCCTC GTGCTCGTGG CGTGCTCGGG CGGCGCGGAC
TCGCTCGCGC TCGCCGCGAC CACGGCCTTC GAGGCGCCCA GGCTCGGGCT CCGCGCCGGC
GCCGTGGTCG TCGACCACCA GGTGCAGACC GGCAGCGCCG AGGTCGCGGC CGAGGCGGCA
GGACGGTGCC GTGACCTCGG GCTCGGACCG GTCGTCGTCC GCACGGTCGA CGTCCCGACC
GGCCCTGGCT CTGGCGGCCC CGAGGCCGCA GCACGTCACG CCCGGTACGC GGCCCTCGAG
GCCGCCGCGG ACGCGGAGGG CGCCGAGGTC GTGCTCCTCG GGCACACCGC CGACGACCAG
GCCGAGACCG TGCTGCTCGG CCTCGCCCGT GGCTCGGGCG CACGCTCCCT CGCCGGCATG
CGGGACGCCG TCGGCCGGTG GCGCCGTCCG CTCCTCGGCC TGCGGCGCAC GGAGACCGAG
GCGGTCTGCG CGGCCCAGGG CCTCGGCTGG TGGGTGGACC CGACCAACGC GGGCACGTCC
CCGGGCGCCC CGCTGCGGTC CCGGGTGCGG GCGAGCGTCC TCCCGGTCCT CGACGACGTC
CTCGGGCCCG GAGTCGTCGA GGCGCTCGCG CGGACCGCCG ACCAGCTCGA CGAGGACGAC
ACGGCGCTCG GGACGCTCGC CGCAGACCTG CTGGAGAGCG CCCGGCGGGC GGCAGGTCCG
GCCGACGGCG ACGGTCGCGC CGTGCGGCTC GACGTCGCGG CCGTCGAGCA GGCGGTCCCG
GCCGTGCGCC GCCGGTGCCT GCGCCTCGCG GCGCTGGCCG CCGGGTGCCC GGCGGGCGCT
CTCACGCGCG AGCACGTCCT CGGTGTCGAC GGGCTGCTCA CCCGGTGGCG CGGGCAGGGG
CCGCTGCACC TGCCGGGCGG GGTCGAGGCG CGCAGGGTGT GTGGCAGGCT TGTCCTGGAA
CACCCCCACC ACTGA
 
Protein sequence
MSGPPQAVAR ARRAVRATLE TVAAEHPGAL VLVACSGGAD SLALAATTAF EAPRLGLRAG 
AVVVDHQVQT GSAEVAAEAA GRCRDLGLGP VVVRTVDVPT GPGSGGPEAA ARHARYAALE
AAADAEGAEV VLLGHTADDQ AETVLLGLAR GSGARSLAGM RDAVGRWRRP LLGLRRTETE
AVCAAQGLGW WVDPTNAGTS PGAPLRSRVR ASVLPVLDDV LGPGVVEALA RTADQLDEDD
TALGTLAADL LESARRAAGP ADGDGRAVRL DVAAVEQAVP AVRRRCLRLA ALAAGCPAGA
LTREHVLGVD GLLTRWRGQG PLHLPGGVEA RRVCGRLVLE HPHH