Gene Sked_29320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_29320 
Symbol 
ID8634566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3268839 
End bp3269561 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content75% 
IMG OID 
Productuncharacterized membrane-associated protein 
Protein accessionYP_003315668 
Protein GI269796213 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.863991 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGGAGC TGGCCGAGAG CGTGCTGCAC ACCGTCGAGA CCTGGGCCGT CGGGCTCGCC 
GCCTCGCCCT GGGTGTTCGT CGTCCTGTTC GTGTTCGTCG TCGTCGACGC GTTCTTCCCG
CCGGTGCCGA GCGAGACGCT CGTCATCGCG GTGGCGGCCT ACGCCGTGTC GACCGGCGGA
CCGCCCCTCT GGGCCATCGT CGCCACCGCT GCCGTCGGAG CCGTGGTCGG TGACTCCACC
GCCTACCTCC TCGGCCGACG CCTCGACATC CGCGGCTGGC GGCTGCTCCG CGCGCGGCGC
GTCCAGACCG CCTTCGACTG GGCCGAGCGG TCCCTCGCCG CGCGACCCGC ACGCTTCATC
ATCTCCGCGC GCTACGTGCC CGTCGGACGC GTCGCCGTCA ACATGACCGC CGGGGCCATC
CGTATCCCCG TCCCGCGGTT CCTCGCCCTC GCCGGCCTGG GCGGCGTCAC CTGGGCCGTC
TACTCGACCG TCATCGGCGT CGGGTCCGGC GTCTGGCTCG GCGACCGACC CCTGCTCGCC
ATGGCCGTGG GGGTCGTCGG CGGCATCGCC CTCGGGTACC TCGTCGACCT CGTCGTCGGA
CGGCTCCTCG GCGGCGCAGA GCTCCCCGGC CCCGCCGGGC GCCTGGAGAC CGACGCCGAG
ACCGGCGCCG AGCCCGTCCC GGAGACCCCG GTCCCCGCGC TCCTCAGATC TTCCGGAGCC
TGA
 
Protein sequence
MLELAESVLH TVETWAVGLA ASPWVFVVLF VFVVVDAFFP PVPSETLVIA VAAYAVSTGG 
PPLWAIVATA AVGAVVGDST AYLLGRRLDI RGWRLLRARR VQTAFDWAER SLAARPARFI
ISARYVPVGR VAVNMTAGAI RIPVPRFLAL AGLGGVTWAV YSTVIGVGSG VWLGDRPLLA
MAVGVVGGIA LGYLVDLVVG RLLGGAELPG PAGRLETDAE TGAEPVPETP VPALLRSSGA