Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_29040 |
Symbol | |
ID | 8634538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 3242467 |
End bp | 3243060 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | site-specific recombinase, DNA invertase Pin |
Protein accession | YP_003315640 |
Protein GI | 269796185 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.436309 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTTGC TCGCCTACAC CAGAGTCAGT ACCGTTTCTC AATCCGACGG GCTCCAGAGA GATGCCGTCA TCGCCGCCGG TGTCGAGGAG CGGCACGTCT ACTCCGACGT GATCAGCGGC GGCAGCGGCT CCGCCACCAG GCCGGGGTTC GCTGCCCTTC TTGCATACGC CCGCCCTGAC GATGAGATCG TCGTCTGGCG TATTGATCGC CTGGGCCGAT CGCTGCTCGA TGTGCTGTCG ACCGTGGAGG ACCTCCAGGC ACGGGGCATT CGGATCCGCA GTCTGCAGGA TGGGATCGAT CCGTCGACGT CGACGGGGAA AATGATGTTG GGGATCCTGG GGACCCTTGC CTCTTACGAA CGCGACCTCG TGCGGGAACG AGTGAATGCT GGGCTCCAGG CAGCCCGATC CCGAGGCGTG CAGCTCGGCC GACGCCCCGT TGAAGCGTCA GCCGTCGCAG GGCAGGTCAA AGCGGCACGC CTCATGATGG CCAGCGGCTC GACGTCGGAG GAGGCGGCCC AAGCCGTTGG GTGGTCACGC GCCACCCTCT ACCGCAACCT CCGCCGCGTT GAAGCTGCGG GGTTGTCAGC GTGA
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Protein sequence | MTLLAYTRVS TVSQSDGLQR DAVIAAGVEE RHVYSDVISG GSGSATRPGF AALLAYARPD DEIVVWRIDR LGRSLLDVLS TVEDLQARGI RIRSLQDGID PSTSTGKMML GILGTLASYE RDLVRERVNA GLQAARSRGV QLGRRPVEAS AVAGQVKAAR LMMASGSTSE EAAQAVGWSR ATLYRNLRRV EAAGLSA
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