Gene Sked_29040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_29040 
Symbol 
ID8634538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3242467 
End bp3243060 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content66% 
IMG OID 
Productsite-specific recombinase, DNA invertase Pin 
Protein accessionYP_003315640 
Protein GI269796185 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.436309 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTGC TCGCCTACAC CAGAGTCAGT ACCGTTTCTC AATCCGACGG GCTCCAGAGA 
GATGCCGTCA TCGCCGCCGG TGTCGAGGAG CGGCACGTCT ACTCCGACGT GATCAGCGGC
GGCAGCGGCT CCGCCACCAG GCCGGGGTTC GCTGCCCTTC TTGCATACGC CCGCCCTGAC
GATGAGATCG TCGTCTGGCG TATTGATCGC CTGGGCCGAT CGCTGCTCGA TGTGCTGTCG
ACCGTGGAGG ACCTCCAGGC ACGGGGCATT CGGATCCGCA GTCTGCAGGA TGGGATCGAT
CCGTCGACGT CGACGGGGAA AATGATGTTG GGGATCCTGG GGACCCTTGC CTCTTACGAA
CGCGACCTCG TGCGGGAACG AGTGAATGCT GGGCTCCAGG CAGCCCGATC CCGAGGCGTG
CAGCTCGGCC GACGCCCCGT TGAAGCGTCA GCCGTCGCAG GGCAGGTCAA AGCGGCACGC
CTCATGATGG CCAGCGGCTC GACGTCGGAG GAGGCGGCCC AAGCCGTTGG GTGGTCACGC
GCCACCCTCT ACCGCAACCT CCGCCGCGTT GAAGCTGCGG GGTTGTCAGC GTGA
 
Protein sequence
MTLLAYTRVS TVSQSDGLQR DAVIAAGVEE RHVYSDVISG GSGSATRPGF AALLAYARPD 
DEIVVWRIDR LGRSLLDVLS TVEDLQARGI RIRSLQDGID PSTSTGKMML GILGTLASYE
RDLVRERVNA GLQAARSRGV QLGRRPVEAS AVAGQVKAAR LMMASGSTSE EAAQAVGWSR
ATLYRNLRRV EAAGLSA