Gene Sked_28600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_28600 
Symbol 
ID8634494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3199212 
End bp3199679 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content74% 
IMG OID 
ProductPTS system, fructose subfamily, IIA component 
Protein accessionYP_003315596 
Protein GI269796141 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0345947 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0698609 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACTT CTACGCCTGC CCCCCTCATC ACCGCCGACC TCGTCGCCCT CGACGTCGTC 
GCAGCCGACC GCGACGAGGC CACCCGTGTC CTCATCGACC TGCTCGCCGC CTCGGGCCGC
GTGACCGACG CCGACGGCTT CCACGCCGAC GTCCGCGCCC GCGAGGCCCA GATGGCGACG
GGCATGCCGG GCGGCGTGGG CCTGCCGCAC GCACGCTCCG AGCACGTCAC CGTCCCGTCG
CTCGCCCTCG CGCGGGTCCC GGCCGGTGTC GACTTCGGTG CGCCGGACGG CCCCGCCACC
CTGATCTTCC TCATCGCGGC GCCCGCCAGC GGCGACAGCG ACCACCTCAA GATCCTCGCG
TCGCTCGCCC GCCGCCTGGT CCACGAGTCC TTCCGTACCT CCCTGCGCGA GGCGCCCGAC
GCCGCGACCG TGGCAGAGAT CGTCACCCGA GAGGTCAACC CCTCATGA
 
Protein sequence
MSTSTPAPLI TADLVALDVV AADRDEATRV LIDLLAASGR VTDADGFHAD VRAREAQMAT 
GMPGGVGLPH ARSEHVTVPS LALARVPAGV DFGAPDGPAT LIFLIAAPAS GDSDHLKILA
SLARRLVHES FRTSLREAPD AATVAEIVTR EVNPS