Gene Sked_28470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_28470 
Symbol 
ID8634481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3178716 
End bp3179741 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content73% 
IMG OID 
ProductABC-type multidrug transport system, ATPase component 
Protein accessionYP_003315583 
Protein GI269796128 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.394696 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCAG GACCCGCACT GGACGTCGCA GACGTCACCA AGACCTTCGG GGGCCGACCG 
CCCCTCCGGG CCAACGACGG CATCAGCCTC ACGGTGGCGG AGGGGTCCGT CGTCGGGCTG
CTCGGCCACA ACGGGGCGGG CAAGTCGACG CTGGTCAACC AGGTCGCCGG CCTGCTGCGG
CCTGACTCCG GCTCGCTGCG GGTGGTCGGC CACGACGCCG TCGCCCACCC CGAGCGTGCA
CGCCGGGAGA TCAGCGTCCA GGCCCAGGCG AACGTCCCTA TCACCGGGCT CACGCCGCGG
ACGGCGATCG AGCTCGTCGG TCGGATCCGG GGAGGGGCGC GACGTGACGT CGCCCGTCGC
ACCACAGCGC TCATCGAGTC GCTCGACCTC GGCCAGTGGG CCTCGACCCC CGCGCACAAG
GTCTCCGGGG GAGTAGCCCG GCTCACGGCC TTCGCGATGA CGGCCGTCGT CCCCGGGCGC
CTCGTCATCC TCGACGAGCC CACCAACGAC GTCGACCCCG TCCGGCGCCG GCTCCTGTGG
ACCCAGATCA AGGCGCTGGC GGACGACGGC GCCGGTGTCC TCCTCGTGAC GCACAACGTG
CGCGAGGCAG AGCACGCCGT CGACGACCTC GTCGTCCTCG ACCGCGGGCG GGTCATCGCT
CACGGGACCG TCGCCGAGCT CACCCACCCG CTGCGCTCCA CGCTCCAGCT GGACGTCGAG
GTCTCACCAG GACGGAGCCT GGCGTGGCCG TCGTGCGCGA CCGGGTCGAG CCGCGACGGG
CTCCGCGCCC GGGCCGCCGT GCCCGCAGGG CGTGCCGCAG AGGCTGTCGC CTGGGCGCAG
GACGCCGTCG ACCGCGGCGA CCTGGACCGC TACTCGGTGA CCCCGGCATC GCTCGAGGAC
GTGTACGTCG ACCTCGTCGG AGCCGCGTCC GAAGCCCACG CCGCCGGGAC CACCGCCGCG
GTAGGGACCT CATCCTCCTC CAGCACCACC ACCTCCACCT CCACCAGCGA AGGAACCGTC
CGATGA
 
Protein sequence
MTAGPALDVA DVTKTFGGRP PLRANDGISL TVAEGSVVGL LGHNGAGKST LVNQVAGLLR 
PDSGSLRVVG HDAVAHPERA RREISVQAQA NVPITGLTPR TAIELVGRIR GGARRDVARR
TTALIESLDL GQWASTPAHK VSGGVARLTA FAMTAVVPGR LVILDEPTND VDPVRRRLLW
TQIKALADDG AGVLLVTHNV REAEHAVDDL VVLDRGRVIA HGTVAELTHP LRSTLQLDVE
VSPGRSLAWP SCATGSSRDG LRARAAVPAG RAAEAVAWAQ DAVDRGDLDR YSVTPASLED
VYVDLVGAAS EAHAAGTTAA VGTSSSSSTT TSTSTSEGTV R