Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_28440 |
Symbol | |
ID | 8634478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 3176267 |
End bp | 3176956 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003315580 |
Protein GI | 269796125 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.533417 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACAAGA AGCTCATCAT CGCGATCGTC GCCGTGGTGG TCGTCGTCGC CGCCGTCTTC GGCGGGACCG CGCTCTACGC CAAGATCCAG AACGACAGGG CACCTGAGGA GCTCGGCCTC TCGACCCCGA CCACCGAGGC CTCCACCGAG CCGGGCACGA GCACCACCAC CGAGGCCGCC GACCTCGCGG GCGACTGGAC CGTCTCCGAC GGCTCCCAGG CCGGCTACCG GGTCGACGAG GTCCTCAACG GCCAGGACGT CACGGTCGTC GGACGCACCG ACGACGTCGA CGGGACGCTC ACCATCGACG GGACCGAGCT CACGACAGCC GACGTCACCG TCTCGATGAC CACGGTAGCG ACCGACAACA GCAACCGCGA CAGCCAGTTC CTCAGCATCC TCAAGACGGA CCAGAACCCG ACGTCGACCT TCACGCTCAC CGAGCCCGTC GACATCTCCG CCATCACCTC CGGCGTGGCC TCGGTCGAGG CCGTCGGAGA CCTCACCATC GCCGGCGTGA CGCAGAGCGT CACCGTCGCC CTCGAGGCGC AGACCACCGC GGACGGCGTC GAGGTCTCCG GGAGCATCCC CGTCACCTTC TCCGACTTCG ACGTCGACGC CCCCGACCTC GGCTTCGTCA AGGTCGAGGA CACCGGCACC GTCGAGATGC TGCTCGAGCT CACGAAGTAG
|
Protein sequence | MNKKLIIAIV AVVVVVAAVF GGTALYAKIQ NDRAPEELGL STPTTEASTE PGTSTTTEAA DLAGDWTVSD GSQAGYRVDE VLNGQDVTVV GRTDDVDGTL TIDGTELTTA DVTVSMTTVA TDNSNRDSQF LSILKTDQNP TSTFTLTEPV DISAITSGVA SVEAVGDLTI AGVTQSVTVA LEAQTTADGV EVSGSIPVTF SDFDVDAPDL GFVKVEDTGT VEMLLELTK
|
| |