Gene Sked_28440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_28440 
Symbol 
ID8634478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3176267 
End bp3176956 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content68% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003315580 
Protein GI269796125 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.533417 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAGA AGCTCATCAT CGCGATCGTC GCCGTGGTGG TCGTCGTCGC CGCCGTCTTC 
GGCGGGACCG CGCTCTACGC CAAGATCCAG AACGACAGGG CACCTGAGGA GCTCGGCCTC
TCGACCCCGA CCACCGAGGC CTCCACCGAG CCGGGCACGA GCACCACCAC CGAGGCCGCC
GACCTCGCGG GCGACTGGAC CGTCTCCGAC GGCTCCCAGG CCGGCTACCG GGTCGACGAG
GTCCTCAACG GCCAGGACGT CACGGTCGTC GGACGCACCG ACGACGTCGA CGGGACGCTC
ACCATCGACG GGACCGAGCT CACGACAGCC GACGTCACCG TCTCGATGAC CACGGTAGCG
ACCGACAACA GCAACCGCGA CAGCCAGTTC CTCAGCATCC TCAAGACGGA CCAGAACCCG
ACGTCGACCT TCACGCTCAC CGAGCCCGTC GACATCTCCG CCATCACCTC CGGCGTGGCC
TCGGTCGAGG CCGTCGGAGA CCTCACCATC GCCGGCGTGA CGCAGAGCGT CACCGTCGCC
CTCGAGGCGC AGACCACCGC GGACGGCGTC GAGGTCTCCG GGAGCATCCC CGTCACCTTC
TCCGACTTCG ACGTCGACGC CCCCGACCTC GGCTTCGTCA AGGTCGAGGA CACCGGCACC
GTCGAGATGC TGCTCGAGCT CACGAAGTAG
 
Protein sequence
MNKKLIIAIV AVVVVVAAVF GGTALYAKIQ NDRAPEELGL STPTTEASTE PGTSTTTEAA 
DLAGDWTVSD GSQAGYRVDE VLNGQDVTVV GRTDDVDGTL TIDGTELTTA DVTVSMTTVA
TDNSNRDSQF LSILKTDQNP TSTFTLTEPV DISAITSGVA SVEAVGDLTI AGVTQSVTVA
LEAQTTADGV EVSGSIPVTF SDFDVDAPDL GFVKVEDTGT VEMLLELTK