Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_27370 |
Symbol | |
ID | 8634371 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | - |
Start bp | 3046161 |
End bp | 3047180 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | transcriptional regulator, LacI family |
Protein accession | YP_003315475 |
Protein GI | 269796020 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0316556 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.625648 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCGAC GACTCGCAGA GGTGGCCCGC AAGGTCGGAG TGTCCGAGGC GACCGTGAGC CGCGTGCTCA ACGGCAAGCC CGGGGTCTCC GAGAGCACCC GGCAGGCGGT GCTCACGGCG CTCGACGTCC TCGGGTACGA GCGCCCCTCC AAGCTGCGCG GCGAGCGCGC CCGGCTCGTC GGCCTCGTCC TGCCGGAGCT GCAGAACCCG ATCTTCCCGG CCTTCGCCGA GGTGGTCGGC GGGGCCCTCG CGCAGCAGGG CTACACGCCC GTGCTCTGCA CGCAGACGGC CGGGGGTGTC ACCGAGGCCG ACTACATCGA CCTGCTCCTC ACGCAGCAGG TGTCGGGCAT CGTGTTCGCC GGTGGCAACT ACGCCCAGCG CGACGCCGCG CACGGGCACT ACGACCGCCT CGTCGAGCGC CGCCTCCCCG CCGTGTTCTT CAACGCCGCG ATCGACGACT TCGAGTTCCC GCGGGTCTCC TGCGACGACG ACGTCGCCGC CGAGCAGGCC GTCGGGCACC TGCTCTCCCT CGGGCACACC GAGATCGGGC TGCTGCTCGG CCCGGTCGAC CACGTCCCGT CGGAGCGCAA GCTCACGGCG GCGCTGGCCT TCGCCGCGCA GCACGGCGTG ACCATCCCGC CGTCGCGCGT CGTGCGCAGC GCGTACTCGC TCGAGAGCGG CCACGCCGCA GCGGGCCGCC TGCTTGCGCA GGGCGTCACC GGCATCGTCT GTGCGAGCGA CCCGCTCGCG CTCGGTGCCA TCCGCGCGGT CCGGCGCTCC GGCCTGCGCG TGCCCGACGA CGTCTCCGTC ATCGGCTACG ACGACTCGGC CTTCATGAAC TGCACCGAGC CCCCGCTCAC CACCGTGCGC CAGCCCATCG AGCCGATGGG GCGCGCCGCG ATCGAGCTGC TCGTCAGCAT CATCGACGGG CAGGAGGTGC TCCCGCAGGA GCTCCTCTTC GAGCCCGAGC TCGTGGTCCG CGGGTCCACC GGGCCGGCGC CGGCGAACCG CGGAGCCTGA
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Protein sequence | MSRRLAEVAR KVGVSEATVS RVLNGKPGVS ESTRQAVLTA LDVLGYERPS KLRGERARLV GLVLPELQNP IFPAFAEVVG GALAQQGYTP VLCTQTAGGV TEADYIDLLL TQQVSGIVFA GGNYAQRDAA HGHYDRLVER RLPAVFFNAA IDDFEFPRVS CDDDVAAEQA VGHLLSLGHT EIGLLLGPVD HVPSERKLTA ALAFAAQHGV TIPPSRVVRS AYSLESGHAA AGRLLAQGVT GIVCASDPLA LGAIRAVRRS GLRVPDDVSV IGYDDSAFMN CTEPPLTTVR QPIEPMGRAA IELLVSIIDG QEVLPQELLF EPELVVRGST GPAPANRGA
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