| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_26620 |
|---|
| Symbol | |
|---|
| ID | 8634296 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 2967400 |
|---|
| End bp | 2967969 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | phage tail protein |
|---|
| Protein accession | YP_003315400 |
|---|
| Protein GI | 269795945 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.6252 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.691503 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGCGAC CCGACTGGCT CGTGGGGCAG CTGCCGCCCG CGATGCTGCA GGAGGACTTC
TTCCGGCGCT TCGTCGAGAT GTTCCAGGCG CAGGCCGACA CCCTCATGGC CCACGCGGAC
GACCTCGAGC ACCTCGCCGA CCCCGGGCTC GCCCCGCCCG AGCTGCTGCC GTGGCTCGCG
TCGTGGATTG GCCTGGAGTC CGTGGACGGC GCAGGTCCTC CCGCGATGCA GCGCGAGGTG
CTGCGCACCG CCGCACGCAC CCTGGCGTGG CGCGGGACGC CCGCCGGGCT GCTCGCCATG
CTCGAGCTGT TCAGCGGTGC ACCCGCCGTC CTCGAGGACG GCGGCGGGGT GTGGCGCGAG
GGCGAGAGCC CCGCGGACAC CGCGTGGGTC GTCATGCGGG TAGCCTCGAC CGGCAACCTC
ACCGAGCGGG CCTTCGCCGA CCTCGTCGCC GACGAGGTCC CCGCGCACGT GCGCGCCGAG
CTCTGGGTCG ACGACCGGCT GGTCTGGCCG CGCCAGAGCG CGCCGACGAC AGCGCCGCTG
TCCGTACCGC AGCCCCCGAC GGAGACCTGA
|
|---|
| Protein sequence | MRRPDWLVGQ LPPAMLQEDF FRRFVEMFQA QADTLMAHAD DLEHLADPGL APPELLPWLA
SWIGLESVDG AGPPAMQREV LRTAARTLAW RGTPAGLLAM LELFSGAPAV LEDGGGVWRE
GESPADTAWV VMRVASTGNL TERAFADLVA DEVPAHVRAE LWVDDRLVWP RQSAPTTAPL
SVPQPPTET
|
|---|
| |