| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_25280 |
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| Symbol | |
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| ID | 8634162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | - |
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| Start bp | 2810594 |
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| End bp | 2811787 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | |
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| Product | ABC-type antimicrobial peptide transport system, permease component |
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| Protein accession | YP_003315266 |
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| Protein GI | 269795811 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.45906 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAGGC CGGCGAGGCT CGCCCCGGGC GACCTGTTCA GGGTCGGCGC GACGGGCCTG
CGCACCAGAC CGATGCGTGC GGTGCTCTCA GCGCTCGGGA TCGCGATCGG CATCGCCGCG
ATGATCGCCG TCGTCGGCAT CTCGACGTCG TCCCGGGCGG AGCTCGACGA GACGCTCTCC
CGGCTGGGGA CGAACCTCCT GCGGGTCGAG CCGGGGGAGG ACGCGCTCGG TTCCGAGACG
CGGCTGCCTG TCGAGTCCGT CTCCATGGTC CGGCGCATCG CCCCCGTGAC CGGGGCCGCC
TCGGTCGGTC TCGTCCCCGA CGCCCGCGCC CTGCGCAACG ACCACGTGCC TCCGCTCGAG
CACGGGGGTG TCACCGTCTC GGCCGCGGAC GAGGAGCTGT ACGGCACCGT CGGACTCACG
ATGTCCAGCG GACGCTGGCT GTCGGCGGCG ACCGACGGTC TGCCCGTCGT CGTCCTCGGG
GCGAAGGCCG CCGAGCACCT CGGGGTGACG GGTCCGGACC CGCAGACGGT CGTGATCATC
GAGGGGCAGC CGTTCAGCGT CAGCGGGGTC CTCGACCCGG TCGAGCTCGC CCCCGAGCTC
GACTCGAGCG TGCTCATGGG CAAGCAGGTC GCGTCCGAGC GGCTCGGTTG GACGGGGGAC
CCGTCGCGGA TCTACGTGCG GACCGTGGAC TCGGCGGTCG ACCCCGTGCG TGACGTCCTC
GGTGCTACCG CGAACCCGGC GGCCCCGAAC CAGGTCGCCG TGTCGCGCCC GTCGGACGCG
CTCGCGGCGA AGGAGGCGAC CGACGCGGCC TTCACGGGTC TGCTCGTCGG GCTCGGGGCG
GTCGCCCTGC TCGTCGGGGG GATCGGCGTC GCGAACACCA TGGTGATCTC GGTCCTCGAG
CGCCGGTCCG AGATCGGCCT GAGGAGGTCC CTCGGGGCCA CCCGGGGGCA GGTGCGGACG
CAGTTCCTCG TGGAGTCGCT GCTGCTCTCC GTCCTCGGTG GCGGCGCGGG GGTGGTCATC
GGCTACGGGA TCACCGCGGT GTACGCCACG TCGCAGGGGT GGGCGACGTC GATCCCGCCG
GTGATCCTCG CTGGTGGGCT CGGTGCGACA CTCCTGATCG GGGCTGTGGC AGGCCTCTAC
CCGGCGATCC GTGCCGCGAG GATGCCGCCC ACCGCGGCGC TCTCGGCCTC CTGA
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| Protein sequence | MLRPARLAPG DLFRVGATGL RTRPMRAVLS ALGIAIGIAA MIAVVGISTS SRAELDETLS
RLGTNLLRVE PGEDALGSET RLPVESVSMV RRIAPVTGAA SVGLVPDARA LRNDHVPPLE
HGGVTVSAAD EELYGTVGLT MSSGRWLSAA TDGLPVVVLG AKAAEHLGVT GPDPQTVVII
EGQPFSVSGV LDPVELAPEL DSSVLMGKQV ASERLGWTGD PSRIYVRTVD SAVDPVRDVL
GATANPAAPN QVAVSRPSDA LAAKEATDAA FTGLLVGLGA VALLVGGIGV ANTMVISVLE
RRSEIGLRRS LGATRGQVRT QFLVESLLLS VLGGGAGVVI GYGITAVYAT SQGWATSIPP
VILAGGLGAT LLIGAVAGLY PAIRAARMPP TAALSAS
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