| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_24540 |
|---|
| Symbol | |
|---|
| ID | 8634089 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 2734893 |
|---|
| End bp | 2735501 |
|---|
| Gene Length | 609 bp |
|---|
| Protein Length | 202 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003315200 |
|---|
| Protein GI | 269795745 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.348199 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.755159 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGGAA CCACGCCGAC CTCCGCGCCG CGGAGCACCC AGGGCAGGCG CAGGCTGCCA
CCCTGGCTCG TCGTGTTCAT CGCGTTCGAC GTCCTCCTGG TCGCCGGCGC CGCGTGGCTG
CTCCTCGGCG GCGGCTCGGG AGGAGACGGA GAGGACGTGG CCCAGAGCCC CTCGCCGTCC
ACGAGCGCAC CGGCCACCAC GGAGCCCAGC GACGACGCCG ACGACCCCGA GCCGTCGCCG
ACGCTCGAGA TCGACCCCGC CGAGGCGACG GTCGTCGCCT CGCCGACGGG CAACATCACC
TGCGCGATCG TCCCCGGGGG CGTGCGCTGC GAGATCGCGT CGCTGGCCGA GGAGCCGGCG
GTCGTCGAGG GCTGCGAGGG GACGGTCGGC CACGTCGTCG AGCTGACCTC CGCGGGTGTC
TCGACCCCGT GCGTCCCCAC GGATGAGACC CCGGCTCCCG CGGGCCCGGA CGTCGCCGTC
CTGGCCTACG GCGAGACGAG CGAGGTCAAC AACTTCGTGT GCGAGAGCAC CGAGACCGGG
ATGCGCTGCA CCGACTCGAC GACCGGCGAC GGCTTCGTCC TCGCCCGTGC GGGCGTCACG
ACCGTCTGA
|
|---|
| Protein sequence | MAGTTPTSAP RSTQGRRRLP PWLVVFIAFD VLLVAGAAWL LLGGGSGGDG EDVAQSPSPS
TSAPATTEPS DDADDPEPSP TLEIDPAEAT VVASPTGNIT CAIVPGGVRC EIASLAEEPA
VVEGCEGTVG HVVELTSAGV STPCVPTDET PAPAGPDVAV LAYGETSEVN NFVCESTETG
MRCTDSTTGD GFVLARAGVT TV
|
|---|
| |