Gene Sked_23970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_23970 
Symbol 
ID8634032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2668208 
End bp2669317 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content75% 
IMG OID 
ProductABC-type Fe3+-siderophore transport system, permease component 
Protein accessionYP_003315145 
Protein GI269795690 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.597722 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGGGTT CGACGCCGGA GGCGGACGCG AGGCCTGCAG CGAAGGCGGG CCCGTCTGGG 
GAGACCAGCC CTGGGCGTCG TCGTGCGCGA CCGGTCCCCT GGCTGCTCGG GGCGACCGTC
GTCCTGGTGG CGACCGTCCT CGTCGCCGTG ACCATCGGCT CGGCCGACCT CGGGGTCGGC
GAGGTGTGGC GGTCTGTCGC GTGGCACGTG ACCCGGGGTC TCGGCGTCGA CGGGCTCCTC
TCCGTCGAGC CGTTGAGCGT GCTGCGCGAC GGCATCGTGT GGGAGCTGCG GCTGCCGCGC
GTGCTCACCG CGGCCGCCGT CGGCGCCGGC CTCGCCCTGT GCGGGGCGGT GATGCAGTCG
CTCACCCGCA ACCCGCTCGC CGACCCCTAC CTGCTAGGCC TGTCCTCCGG GGCGTCCCTC
GGTGCCGTCC TCGTGCTGGT CCTGGGGGTC AGCGTGCTGC TCCCGGTCGC GGCCTTCGCG
GGCGCGGTCC TCGCCCTCGC CGCAGCTCTC GGGCTCGCCG GGGCTCTCGG CGCGATCACC
CCGACGCGGA CCATCCTGTC CGGCCTGGCG GTCAGCCAGC TCTGCGCCGC CGCGACGTCC
TTCGTGATCT TCTGGTCCGC GACGGGCGAC TCCTACCGGG AGATCCTGTC CTGGCTCATG
GGGTCGGTGG CCGGTGCCAC CTGGGGTTCG GTCGCGATCG CGGGGATCGC CGTGCTGGTG
CTCGGCTCGG TGCTCGCACT GTCGGGGTCG GTGCTCGACG CCTTCACCTT CGGCGACTCG
TCCGCGGCGG CGCTCGGCGT CTCAGTGGAG CGGACCCGGT GGCTGCTCCT CGTCGGTGTC
GCGCTGCTCA CCGGGGCGCT GGTGTCGGTC TCCGGCGCGG TGGGGTTCGT CGGGCTGATC
CTGCCGCACG CCGTCCGACT GCTCACCGGG GCGCGGCACC GGCTCCTGCT GCCGCTCGCC
GCGCTGACGG GGGCGTCGTT CCTCGTGTGG GCCGACACGA TCGCCCGGAC GGTCTTCGCG
CCGCGAGAGG TGCCCGTCGG GATCATCACC GCGGCTATCG GCGCGCCCGT GTTCGCGCTG
CTGCTGTGGC GCGGACGGAG GTCGGCGTGA
 
Protein sequence
MAGSTPEADA RPAAKAGPSG ETSPGRRRAR PVPWLLGATV VLVATVLVAV TIGSADLGVG 
EVWRSVAWHV TRGLGVDGLL SVEPLSVLRD GIVWELRLPR VLTAAAVGAG LALCGAVMQS
LTRNPLADPY LLGLSSGASL GAVLVLVLGV SVLLPVAAFA GAVLALAAAL GLAGALGAIT
PTRTILSGLA VSQLCAAATS FVIFWSATGD SYREILSWLM GSVAGATWGS VAIAGIAVLV
LGSVLALSGS VLDAFTFGDS SAAALGVSVE RTRWLLLVGV ALLTGALVSV SGAVGFVGLI
LPHAVRLLTG ARHRLLLPLA ALTGASFLVW ADTIARTVFA PREVPVGIIT AAIGAPVFAL
LLWRGRRSA