Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_23030 |
Symbol | |
ID | 8633938 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | - |
Start bp | 2561083 |
End bp | 2561526 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | LysM domain-containing protein |
Protein accession | YP_003315052 |
Protein GI | 269795597 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.14716 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGATT CCGCACTGGT GCTGACACCC GGGCGCGAGC TCCGCCTCGT CCGCGACGGA GAGGTCCCTG CGTCCGGGCG CGCCTCGTCC GTGAGTGCCT CGGCGGCGGC CGGTCTGCCG CGCGGCGCCT CGGCTCCTGC CGGCGGCTCC CTGCGCGACC TGCGTCTGAC GCGCCGCGGC TGGTGGGTGC TCTCCCTCGT CGCGGTCCTG CTGGTGGTGG CGGGCATGGT CGTCGGTGAC CGTGCGTTCG CCAGCGCTCC GGCGGAGGCG GTCAGCGTGA CCGAGCACTA CGTGGCGCAG GGCGAGACGC TCTGGAAGAT CGCCCGCACC GTCGCGCTCC CTGGCGAGGA CACCCGGGAC GTGGTGGAGA TGCTGGTCGA GCTCAACGGC CGGTCGAGCG CCTCGCTGCA GGTCGGCGAG CAGCTGTTGC TCCCGGTGCG ATGA
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Protein sequence | MADSALVLTP GRELRLVRDG EVPASGRASS VSASAAAGLP RGASAPAGGS LRDLRLTRRG WWVLSLVAVL LVVAGMVVGD RAFASAPAEA VSVTEHYVAQ GETLWKIART VALPGEDTRD VVEMLVELNG RSSASLQVGE QLLLPVR
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