Gene Sked_21410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_21410 
Symbol 
ID8633776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2389523 
End bp2390245 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content74% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003314895 
Protein GI269795440 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.787281 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.739491 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATAACTC GTCGTCCCGT CCAGCTCGCA CTGCTCGCCG CCTCTGCCGC CGCAGCGGCC 
ACCTGCATCA CAGCCGCCCG GTCTGCGGCG CTCGGCTGGG GCTCGACCGC CTACGAACGC
TGGCGCCCGC TCCCGGGCGA CGAGCTCGTC GCCCACCCCG ACCTCGTCGC GACCCGTGCG
ATCACCATCG ACGCACCGTG CCGCGAGGTG TGGCCGTGGG TGGTGCAGGT CGGCCAGGGC
CGGGGTGGCT TCTACAGCTA CGACCGGCTC GAGAACCTCG CAGGCCTGGG GGTCCGGAGC
GCGGACCGCG TGATGCCCGA GCTGCAGTCG CTCGACGTCG GGGACACCGT GCGGCTCGCC
CCGCGGGTCG CCCTGACGGT CGAGGAGGTC GTCCCTGGCC GCGCCGTCGT GCTCTCCGGG
GACTGCGACC CCACCGACCC GCGCGAGCCC CTCGTCCTCG ACGACCACGG CCGGGCGGTG
ACCTCGACCG GCCCCGCCCC GTACGAGTTC TCCTGGGCGT TCGTGCTCGT CCCCACGGGC
GAGGACACCT GCCGGCTCGT CGTCCGTGAG CGCTACGGGT ACACCGCAGC ATGGTCGGCA
GCCGTCGCCG AGCCGGTCGG ATGGGTGAGC GCGGTCATGA CGCAGCGGAT GCTGCGAGGC
ATCCGCGACC GGGCGCAGGG CGAGCGGCTG CGCAACGGCT CACAGGCGAC TGCCGTCGCC
TGA
 
Protein sequence
MITRRPVQLA LLAASAAAAA TCITAARSAA LGWGSTAYER WRPLPGDELV AHPDLVATRA 
ITIDAPCREV WPWVVQVGQG RGGFYSYDRL ENLAGLGVRS ADRVMPELQS LDVGDTVRLA
PRVALTVEEV VPGRAVVLSG DCDPTDPREP LVLDDHGRAV TSTGPAPYEF SWAFVLVPTG
EDTCRLVVRE RYGYTAAWSA AVAEPVGWVS AVMTQRMLRG IRDRAQGERL RNGSQATAVA