| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_20970 |
|---|
| Symbol | |
|---|
| ID | 8633732 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 2339661 |
|---|
| End bp | 2340938 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | cysteinyl-tRNA synthetase |
|---|
| Protein accession | YP_003314853 |
|---|
| Protein GI | 269795398 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.842697 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.719038 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTCACCT GGCCTGCCCC ACAGATCCCT GAACTTCCCG GCCGCGGCGA CGTCGTCCGC
GTCCACGACA GCTCCACCGG CCGGCTGGTC GTCGCCGCCG AGGGGCCGTC GGCGTCGCTG
TACGTGTGCG GCATCACGCC CTACGACGCG ACCCACATCG GCCACGCGGC CACCTACGTG
GCCTTCGACC TCCTCGGTCG GGCGTGGCGC GACGCCGGCC AGCAGGTCAC CTACGCCTCG
AACGTCACCG ACGTCGACGA CCCGCTGCTC GAGCGGGCCA CGGCCACCGG CGTCGAGTGG
CAGGACCTCG CGGTCGAGCA GACGGCGCTG TTCGCCGAGG ACATGACGGC CCTCGGCGTC
GTGCCGCCCG ACGTGTACCT CGGTGCGGTC GAGACCATCC CCCCGGTCGC CGCCGCGGTC
GAGGAGCTCG TGGCGGCCGG CGCGGCGTAC CGCGTGCCCC TCGAGGAGGG CGCCGGCGGT
GACGCGCCCG CTCTCGGCGA CGTGTACGCC GACGTGACGG CCGACAGCGC CTTCGGGCAG
GTGTCGCGCA TGGACGAGGC GACCATGCTC GAGCTCTTCG CGGAGCGCGG GGGAGACCCC
GGGCGTGCCG GCAAGCGCAA CGCCCTCGAC CCGCTGCTCT GGCGCCGGGA GCGCCCGGGC
GAGCCGGCCT GGGAGGCCGG TTCCCTCGGG ACGGGCCGTC CCGGCTGGCA CATCGAGTGC
GCCGTGATCG CCCGCGCAGG CCTCGGCCTG CCCTTCGACG TGCAGGGCGG CGGGTCCGAC
CTGCTGTTCC CGCACCACGA GATGAGCACC TCGCACGCCC GCCTCATCGG TGACGGCGAC
GTCCACGGCG TCGGCGCGGC GACGCACGTG CACGCCGGCC TCGTCGGCTA CCAGGGCGAG
AAGATGAGCA AGTCACGCGG CAACCTCGTG TTCGTGTCCC GGCTGCGCGC CGAGGGCGTC
GAGCCCATGG CGATCCGCCT CGCGCTGCTC GCCCACCACT ACCGCTCCGA CTGGGAGTGG
ACCGACGCGA GCCTCACCGA GGGTGTCGCC CGCTTCGAGA CGTGGCGCTC GGCGGTCTCC
GGCAACGGCG GACCCGACGC CGACGCGACC CTCGCCGAGG TCCGTGCAGC CCTCGCCGAC
GACCTCGACG CGCCCCGTGC GCTGGCCGCC GTCGACCGGT GGGCCGAGCT CTCGCTCGCC
GGCACGGAGA AGCCGGTCGA GGGAGCGCCG GGTGTCGTCT CGCGTGCCGT CAACGCGCTG
CTGGGCGTGC GCCTGTAG
|
|---|
| Protein sequence | MLTWPAPQIP ELPGRGDVVR VHDSSTGRLV VAAEGPSASL YVCGITPYDA THIGHAATYV
AFDLLGRAWR DAGQQVTYAS NVTDVDDPLL ERATATGVEW QDLAVEQTAL FAEDMTALGV
VPPDVYLGAV ETIPPVAAAV EELVAAGAAY RVPLEEGAGG DAPALGDVYA DVTADSAFGQ
VSRMDEATML ELFAERGGDP GRAGKRNALD PLLWRRERPG EPAWEAGSLG TGRPGWHIEC
AVIARAGLGL PFDVQGGGSD LLFPHHEMST SHARLIGDGD VHGVGAATHV HAGLVGYQGE
KMSKSRGNLV FVSRLRAEGV EPMAIRLALL AHHYRSDWEW TDASLTEGVA RFETWRSAVS
GNGGPDADAT LAEVRAALAD DLDAPRALAA VDRWAELSLA GTEKPVEGAP GVVSRAVNAL
LGVRL
|
|---|
| |