Gene Sked_20270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_20270 
Symbol 
ID8633662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2259823 
End bp2260656 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content65% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003314784 
Protein GI269795329 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.161196 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGGAG AGACACGATG GCGAGAACTG GGAGACTTCC TCCGAGCACG CAGGGCTGAG 
CTCACCCCTG CAGATCTCGG TCTCCCGATC TCTGGTCAGA TCAGACGCGT CCCAGGGCTC
CGTCGCGAAG AGGTAGCTCA GGCGACGTCG ATCAGCACGG AGTACTACAC CCGCCTGGAG
CAGGGCAGGC TGCCAGCCTC TGCTCCCGTG CTCAACGACC TGGCTCGAGT GCTCCAGCTG
ACCTCAGACC AGCGCGCCTA CCTGACCGGA CTGACTGGCA AACCGGTGAC CGGCACCGTT
CCCCCCGTCC ACAGGACGCT CGATGCCCCA GTCCAGCGGA TGCTCGACGA CCTGGTCGCG
ACACCGGCGT TCGTGATGGG TCCTCGGACC GAGATCGTCG GATGGAACGC ACTGGGTGCA
GCGCTCATCA CCGACTTCGC TGCGATCCCC GAGCACGAGC GGTACTTCAT CCGCCTGCTG
TTCACAGACC CCGCGATGCG CGAGCTCTAC GCCGACTGGC TCAGCGTCGT AGACCTCGCC
ATCGCACAGC TGCGCATGGA CAGCGCCGCC AACCCGGAGG ACGAGAAGCT GCACGAGATC
GTCAGGGACC TCTCGGAGAT CGACCCTGAC TTCCACGATC TGTGGAGCAG CCACGAGGTC
GCCGTCCGAG GGTCAGGGAC CAAGATCTTG TGGCACCCGG TGGTAGGTGA GCTCACGCTC
GACTGGGGCG CTCTCACCGA CGGCGCCGGG CACACGATGA TCATCTGGAC AGCCGAGCGC
GGCTCCGCCT CCCACCTTCG GCTCGAGCGG CTGGCGGAGA TCTCTGAAGA CTGA
 
Protein sequence
MAGETRWREL GDFLRARRAE LTPADLGLPI SGQIRRVPGL RREEVAQATS ISTEYYTRLE 
QGRLPASAPV LNDLARVLQL TSDQRAYLTG LTGKPVTGTV PPVHRTLDAP VQRMLDDLVA
TPAFVMGPRT EIVGWNALGA ALITDFAAIP EHERYFIRLL FTDPAMRELY ADWLSVVDLA
IAQLRMDSAA NPEDEKLHEI VRDLSEIDPD FHDLWSSHEV AVRGSGTKIL WHPVVGELTL
DWGALTDGAG HTMIIWTAER GSASHLRLER LAEISED