Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_19930 |
Symbol | |
ID | 8633628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | - |
Start bp | 2216368 |
End bp | 2217252 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | protoheme IX farnesyltransferase |
Protein accession | YP_003314751 |
Protein GI | 269795296 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.440013 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTGCGGC GCCGGATCGG GGCGTACGTC GCCCTGACCA AGCCGCGCGT CATCGAGCTC CTGCTCGTCA CGACCATCCC GACGATGATG CTCGCCGAGC GCGGCTTCCC GTCGCTGTGG CTCGTGCTCG CCACCCTCGT CGGCGGTGCC GGCGCGGCCG GCGCGTCGGG GGTCCTCAAC TGCTACCTCG ACCGTGACAT CGACGAGGTG ATGAACCGCA CCAAGCGTCG CCCGATCGTC ACCGGCGAGG TCTCGCCCCG TAACGCGCTG ATCTTCGGCC TCGTGCTCGG CGCCGTGTCG CTCGCGTGGT TCGCGGTCTT CGTCAACATG GCCTCGGCGC TGCTGACCGC CGCGGCGATC GCGATCTACG TGGTCGGCTA CACGATGATC CTCAAGCGCC GCACCCCGCA GAACATCGTG TGGGGCGGGA TCGCGGGCTG CATGCCGGTG TTCATCGGCT GGTCCGCGGT CACCGGTGGC CTCAGCTGGG GCGCCGTGGC GCTGTTCCTC GTGATCTTCT TCTGGACCCC GCCGCACTAC TGGCCGCTGT CGATGAAGTT CCGCCGCGAC TACGCCGACG CCGGCGTCCC GATGCTCCCC GTCGTCGCCG ACGACCTCAA GGTCGCCCGC GAGATGATCA TCTACACGGT CGCCATGATC GCGTGCTCGC TCGCGCTCGT CCCGCTCGAG GGCATGACCT GGGTCTACGC CGTGGTCGCC TCGCTGTTGG GTGCCTGGTT CCTCGGTCAG TGCATCGGCA TGTACCGCCG CGCCGCCGAC CCCAGCCGCG GCAAGCTCGG CGCCATGAAG GTGTTCCACG GCTCGATCAC CTACCTCACG CTCCTGTTCG TCGCCGTCGC GGTCGACGTC TTCCTGCCCT TCTGA
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Protein sequence | MLRRRIGAYV ALTKPRVIEL LLVTTIPTMM LAERGFPSLW LVLATLVGGA GAAGASGVLN CYLDRDIDEV MNRTKRRPIV TGEVSPRNAL IFGLVLGAVS LAWFAVFVNM ASALLTAAAI AIYVVGYTMI LKRRTPQNIV WGGIAGCMPV FIGWSAVTGG LSWGAVALFL VIFFWTPPHY WPLSMKFRRD YADAGVPMLP VVADDLKVAR EMIIYTVAMI ACSLALVPLE GMTWVYAVVA SLLGAWFLGQ CIGMYRRAAD PSRGKLGAMK VFHGSITYLT LLFVAVAVDV FLPF
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