Gene Sked_19930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_19930 
Symbol 
ID8633628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2216368 
End bp2217252 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content69% 
IMG OID 
Productprotoheme IX farnesyltransferase 
Protein accessionYP_003314751 
Protein GI269795296 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.440013 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGCGGC GCCGGATCGG GGCGTACGTC GCCCTGACCA AGCCGCGCGT CATCGAGCTC 
CTGCTCGTCA CGACCATCCC GACGATGATG CTCGCCGAGC GCGGCTTCCC GTCGCTGTGG
CTCGTGCTCG CCACCCTCGT CGGCGGTGCC GGCGCGGCCG GCGCGTCGGG GGTCCTCAAC
TGCTACCTCG ACCGTGACAT CGACGAGGTG ATGAACCGCA CCAAGCGTCG CCCGATCGTC
ACCGGCGAGG TCTCGCCCCG TAACGCGCTG ATCTTCGGCC TCGTGCTCGG CGCCGTGTCG
CTCGCGTGGT TCGCGGTCTT CGTCAACATG GCCTCGGCGC TGCTGACCGC CGCGGCGATC
GCGATCTACG TGGTCGGCTA CACGATGATC CTCAAGCGCC GCACCCCGCA GAACATCGTG
TGGGGCGGGA TCGCGGGCTG CATGCCGGTG TTCATCGGCT GGTCCGCGGT CACCGGTGGC
CTCAGCTGGG GCGCCGTGGC GCTGTTCCTC GTGATCTTCT TCTGGACCCC GCCGCACTAC
TGGCCGCTGT CGATGAAGTT CCGCCGCGAC TACGCCGACG CCGGCGTCCC GATGCTCCCC
GTCGTCGCCG ACGACCTCAA GGTCGCCCGC GAGATGATCA TCTACACGGT CGCCATGATC
GCGTGCTCGC TCGCGCTCGT CCCGCTCGAG GGCATGACCT GGGTCTACGC CGTGGTCGCC
TCGCTGTTGG GTGCCTGGTT CCTCGGTCAG TGCATCGGCA TGTACCGCCG CGCCGCCGAC
CCCAGCCGCG GCAAGCTCGG CGCCATGAAG GTGTTCCACG GCTCGATCAC CTACCTCACG
CTCCTGTTCG TCGCCGTCGC GGTCGACGTC TTCCTGCCCT TCTGA
 
Protein sequence
MLRRRIGAYV ALTKPRVIEL LLVTTIPTMM LAERGFPSLW LVLATLVGGA GAAGASGVLN 
CYLDRDIDEV MNRTKRRPIV TGEVSPRNAL IFGLVLGAVS LAWFAVFVNM ASALLTAAAI
AIYVVGYTMI LKRRTPQNIV WGGIAGCMPV FIGWSAVTGG LSWGAVALFL VIFFWTPPHY
WPLSMKFRRD YADAGVPMLP VVADDLKVAR EMIIYTVAMI ACSLALVPLE GMTWVYAVVA
SLLGAWFLGQ CIGMYRRAAD PSRGKLGAMK VFHGSITYLT LLFVAVAVDV FLPF