| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_19470 |
|---|
| Symbol | |
|---|
| ID | 8633582 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 2169644 |
|---|
| End bp | 2170507 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | short-chain dehydrogenase of unknown substrate specificity |
|---|
| Protein accession | YP_003314706 |
|---|
| Protein GI | 269795251 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTACTG CTCTCATCAC GGGCGGCACC TCCGGCATCG GCGCCGCGTT CGCCGAGGCG
CTGGCTGCCC GTGGCGTCGA CCTCGTCCTC GTGGCCCGAG ACGAAGGACG CCTCACGGAC
TCCGCGACGA GACTGGCCTC CACCCACGGG ATCACCGTCG ACACCCTGCG CGCCGACCTT
GCCGTCCGCG CCGACGTCGA GCGGGTCGCG GCACGGCTCG AGGACACGAC GCGCCCGGTC
GAGCTGCTCG TCAACAACGC GGGGTCCGGC GTCCGCACCC CGCTCGTCTC CCGCGACGTG
GCCTCGCACG ACCTCGGCTT CGACGTCATG TGCCGCGCGG TGCTGGTCCT CGGCGGAGCC
GCCGGCCGGG CCATGTCGGC CCGCGGCTCA GGCGCGATCA TCAACGTGTC CAGCCTGCAG
AGCCTGTTCA CCACCGGCTC CTACGCCGCG ATGAAGGCGT GGGTGACGTC GTACTCCCAG
GGCCTCTCGG TCGAGCTGCA CGGCACCGGC GTCACCGTGA CCGCCGTGCT GCCCGGGTGG
GTGCGCACCG ACTGGCACGC GCGCGACGGC GAGCGACGCA GCTCCGTGCC CGGCTGGCTG
TGGACCGAAC CAGCCGACGT GGCCCTCGCC GCGCTCCGCG ACTCCGCCCG GGGACGGGTC
GTCTCGGTCC CCTCCCGGCG CTACCGCGTC ATCGGATGGC TCGCCCGGCA CCTGCCGCGC
GCGACGGTCC GGCAGATCTC GGGCAGAATC TCGTCGAGCA GACGGGACTC CCCGCCCGAC
ACCAGCCCGC CCACCGCCAG CCCGCCCACC GCCAGCCCCG GCACCGACGC CCCCACCCGC
ACCGTACGAA CCGAGGACTC CTGA
|
|---|
| Protein sequence | MATALITGGT SGIGAAFAEA LAARGVDLVL VARDEGRLTD SATRLASTHG ITVDTLRADL
AVRADVERVA ARLEDTTRPV ELLVNNAGSG VRTPLVSRDV ASHDLGFDVM CRAVLVLGGA
AGRAMSARGS GAIINVSSLQ SLFTTGSYAA MKAWVTSYSQ GLSVELHGTG VTVTAVLPGW
VRTDWHARDG ERRSSVPGWL WTEPADVALA ALRDSARGRV VSVPSRRYRV IGWLARHLPR
ATVRQISGRI SSSRRDSPPD TSPPTASPPT ASPGTDAPTR TVRTEDS
|
|---|
| |