| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_19440 |
|---|
| Symbol | |
|---|
| ID | 8633579 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 2165618 |
|---|
| End bp | 2166433 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003314703 |
|---|
| Protein GI | 269795248 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.577003 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGCGTG ACATGGCATT CGACATCGAC AGGTACACCG CGACGTCAGT CAGCGTGAAC
TGGGACGACC TCGACTTCGA GGAGTTCAGC CGCACCCCGC TGCCCGAGTC CACGCTGCGC
AGCCTGCGCT ACATGTGCGA CATCGAGTAC CACACGGTCT GCTACCTGCG GGACCTGCTC
GTCACGCCCT CGCACAAGGA GGCGGACGTC AGCGCCTTCA TGACGATGTG GAACCGCGAG
GAGTTCTGGC ACGGCGAGGC CCTGGCCGCG GTCCTCGGCG CGCACGGCAT CACCGTGGAC
TTCGACGAGC TCAAGGCCAC GCGCCTCAAG CTCGGGTGGA AGGACCGCCT CGACCCGATC
AAGCAGTCGA TGCTCGGCAA CGTGGTGGGC AAGGACTTCA TCGCGGTGCA CATGATCTGG
GGCGCGGCCA ACGAGTGGTC GGCCGTCGCG GCGTACAACC GGCTCGCCGA CCTCGAGAAG
CACCCGGTGC TGGCCGTGCT GCTGCGGCGC ATCGCCAAGC AGGAGGCCCG CCACGTCGCC
TTCTACGCCA CCCAGGCGCG CGAGCGCCTC GGCAGCAGCA AGAAGGCGCA GGTGCTCGCC
CGCTTCGCGC TGAAGAACGC GTGGGCGCCG GTCGGCTCGA GCGTCATGGA GCCCGAGGAG
GTCACCCACG TGATGGGTCA CCTGTTCGCC GGCGAGGAGG GCCTGCGCGA GATCCGCAAG
CTCGACGAGC ACATCTCCCG CATGCCGGGC CTCGACGGCC TGAAGATCGT CGAGACCGCG
ATGATCAAGC ACGGGGTCGC CGTCCCGGCT GCCTGA
|
|---|
| Protein sequence | MVRDMAFDID RYTATSVSVN WDDLDFEEFS RTPLPESTLR SLRYMCDIEY HTVCYLRDLL
VTPSHKEADV SAFMTMWNRE EFWHGEALAA VLGAHGITVD FDELKATRLK LGWKDRLDPI
KQSMLGNVVG KDFIAVHMIW GAANEWSAVA AYNRLADLEK HPVLAVLLRR IAKQEARHVA
FYATQARERL GSSKKAQVLA RFALKNAWAP VGSSVMEPEE VTHVMGHLFA GEEGLREIRK
LDEHISRMPG LDGLKIVETA MIKHGVAVPA A
|
|---|
| |