Gene Sked_18090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_18090 
Symbol 
ID8633445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2017822 
End bp2018769 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content75% 
IMG OID 
Productmethionyl-tRNA formyltransferase 
Protein accessionYP_003314570 
Protein GI269795115 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.783991 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.456867 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCTGC TCTTCGCCGG GACCCCGGCC GTAGCTGTCC CTGCCCTGGA AGCCCTCATC 
GGGTCGCGGC ACGAGGTCGT CGCCGTGCTG ACCCGTGCGG ACGCCCGCGC CGGGCGCGGC
CGGCAGCTCG TGCCCAGCCC CGTGCGCCAG CGCGCCGAGG AGGCCGGCAT CGAGGTCATC
ACCGACCGAC CCCGCTCCGA GGGCTTCGTC GAGCGCCTCG AGGCGCTGCA GGTCGACTGC
GCACCCGTCG TGGCCTACGG CGAGATCCTG CCGCGCGACG TGCTGGCGGT GCCTCGCAAC
GGCTGGGTGA ACCTGCACTT CTCGGTGCTC CCTGCCTGGC GCGGCGCCGC TCCGGTGCAG
CGCGCCGTCA TCGCCGGCGA CGAGGTCACG GGTGCCTCCA CCTTCATCAT CGAGGAGGGC
CTGGACACCG GGCCGGTCCT CGGGACCGCC ACCGAGACCA TCCGCCGCCG CGACACCTCG
GGCGACCTGC TCGACAGGCT CTCCCGCTCC GGGGCCGGCC TGCTCGTGGC CACGCTCGAC
GCGATCGAGG ACGGCGCGAT CATCCCCGTC CCGCAGCCCG CGGACGGCGT GAGCCACGCC
GCGAAGCTCA CCGTCGAGGA CGCCCGCGTC CTCTGGACCC ACCCGGCGCA CGCCGTCGAC
CGCCTCGTCC GCGGCTGCAC GCCCGCGCCC GGGGCGTGGA CCACGCTGCC CGACGGGTCG
CGCCTGGGGC TGGGCCCCGT GACGCCGCTC GACGAGCCCC TCGAGGTCTC GCTCGAGCCC
GGTGAGGTGC AGGTGACCAA GTCTGCGGTC CGGGTCGGGA CGGCGACCGT CCCCGTCGAG
CTCGGCGAGG TGCGCCCGGC GGGCAAGAAG CCCATGAAGG CCGCCGACTG GGCGCGAGGT
GCCCGTCTCG ACGACGGTCT GCGCCTCGGC CAGGAGGTGT CCGCGTGA
 
Protein sequence
MRLLFAGTPA VAVPALEALI GSRHEVVAVL TRADARAGRG RQLVPSPVRQ RAEEAGIEVI 
TDRPRSEGFV ERLEALQVDC APVVAYGEIL PRDVLAVPRN GWVNLHFSVL PAWRGAAPVQ
RAVIAGDEVT GASTFIIEEG LDTGPVLGTA TETIRRRDTS GDLLDRLSRS GAGLLVATLD
AIEDGAIIPV PQPADGVSHA AKLTVEDARV LWTHPAHAVD RLVRGCTPAP GAWTTLPDGS
RLGLGPVTPL DEPLEVSLEP GEVQVTKSAV RVGTATVPVE LGEVRPAGKK PMKAADWARG
ARLDDGLRLG QEVSA